Protein–RNA interactions for Protein: P31274

HOXC9, Homeobox protein Hox-C9, humanhuman

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9P31274 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.94□□□□□ -1.46
HOXC9P31274 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.94□□□□□ -1.46
HOXC9P31274 MIR383-201ENST00000362257 73 ntBASIC5.94□□□□□ -1.46
HOXC9P31274 MIR3065-201ENST00000390137 79 ntBASIC5.94□□□□□ -1.46
HOXC9P31274 AL161909.1-201ENST00000397390 712 ntBASIC5.94□□□□□ -1.46
HOXC9P31274 AL583835.1-201ENST00000399570 407 ntBASIC5.94□□□□□ -1.46
HOXC9P31274 SNORA11F-201ENST00000408237 128 ntBASIC5.94□□□□□ -1.46
HOXC9P31274 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.94□□□□□ -1.46
HOXC9P31274 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC5.94□□□□□ -1.46
HOXC9P31274 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC5.94□□□□□ -1.46
HOXC9P31274 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.94□□□□□ -1.46
HOXC9P31274 CDC27P1-201ENST00000445384 715 ntBASIC5.94□□□□□ -1.46
HOXC9P31274 AC017099.1-201ENST00000448261 1028 ntBASIC5.94□□□□□ -1.46
HOXC9P31274 OR52Y1P-201ENST00000452418 828 ntBASIC5.94□□□□□ -1.46
HOXC9P31274 RPS27AP17-201ENST00000463344 455 ntBASIC5.94□□□□□ -1.46
HOXC9P31274 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
HOXC9P31274 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC5.94□□□□□ -1.46
HOXC9P31274 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC5.94□□□□□ -1.46
HOXC9P31274 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC5.94□□□□□ -1.46
HOXC9P31274 AC090948.2-201ENST00000607363 564 ntBASIC5.94□□□□□ -1.46
HOXC9P31274 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.94□□□□□ -1.46
HOXC9P31274 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC5.94□□□□□ -1.46
HOXC9P31274 AC140479.6-201ENST00000633535 357 ntBASIC5.94□□□□□ -1.46
HOXC9P31274 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
HOXC9P31274 AL158163.1-201ENST00000603915 1649 ntBASIC5.94□□□□□ -1.46
HOXC9P31274 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HOXC9P31274 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HOXC9P31274 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
HOXC9P31274 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HOXC9P31274 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HOXC9P31274 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.94□□□□□ -1.46
HOXC9P31274 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HOXC9P31274 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.93□□□□□ -1.46
HOXC9P31274 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HOXC9P31274 MIR134-201ENST00000385258 73 ntBASIC5.93□□□□□ -1.46
HOXC9P31274 AL022722.2-201ENST00000402519 180 ntBASIC5.93□□□□□ -1.46
HOXC9P31274 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HOXC9P31274 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC5.93□□□□□ -1.46
HOXC9P31274 RPL34P6-201ENST00000432390 345 ntBASIC5.93□□□□□ -1.46
HOXC9P31274 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HOXC9P31274 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC5.93□□□□□ -1.46
HOXC9P31274 MRPL48P1-201ENST00000445390 636 ntBASIC5.93□□□□□ -1.46
HOXC9P31274 AC239367.2-201ENST00000447309 705 ntBASIC5.93□□□□□ -1.46
HOXC9P31274 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.93□□□□□ -1.46
HOXC9P31274 C1DP3-201ENST00000455013 423 ntBASIC5.93□□□□□ -1.46
HOXC9P31274 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.93□□□□□ -1.46
HOXC9P31274 IGLVVI-25-1-201ENST00000521893 249 ntBASIC5.93□□□□□ -1.46
HOXC9P31274 KCTD9P6-201ENST00000522306 950 ntBASIC5.93□□□□□ -1.46
HOXC9P31274 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC5.93□□□□□ -1.46
HOXC9P31274 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HOXC9P31274 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.93□□□□□ -1.46
HOXC9P31274 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HOXC9P31274 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC5.93□□□□□ -1.46
HOXC9P31274 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HOXC9P31274 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
HOXC9P31274 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
HOXC9P31274 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC5.93□□□□□ -1.46
HOXC9P31274 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HOXC9P31274 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HOXC9P31274 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HOXC9P31274 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC5.92□□□□□ -1.46
HOXC9P31274 AL603750.1-201ENST00000624216 1717 ntBASIC5.92□□□□□ -1.46
HOXC9P31274 RNU6-819P-201ENST00000364116 107 ntBASIC5.92□□□□□ -1.46
HOXC9P31274 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HOXC9P31274 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
HOXC9P31274 RPL32P23-201ENST00000397237 405 ntBASIC5.92□□□□□ -1.46
HOXC9P31274 RPS27AP11-201ENST00000402798 447 ntBASIC5.92□□□□□ -1.46
HOXC9P31274 ARAFP1-201ENST00000422172 605 ntBASIC5.92□□□□□ -1.46
HOXC9P31274 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC5.92□□□□□ -1.46
HOXC9P31274 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC5.92□□□□□ -1.46
HOXC9P31274 RPL5P12-201ENST00000477071 851 ntBASIC5.92□□□□□ -1.46
HOXC9P31274 PARP4P3-201ENST00000510265 317 ntBASIC5.92□□□□□ -1.46
HOXC9P31274 AC008958.1-201ENST00000511047 682 ntBASIC5.92□□□□□ -1.46
HOXC9P31274 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC5.92□□□□□ -1.46
HOXC9P31274 SNORA70.17-201ENST00000516449 133 ntBASIC5.92□□□□□ -1.46
HOXC9P31274 MIR2116-201ENST00000517221 80 ntBASIC5.92□□□□□ -1.46
HOXC9P31274 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC5.92□□□□□ -1.46
HOXC9P31274 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HOXC9P31274 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC5.92□□□□□ -1.46
HOXC9P31274 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC5.92□□□□□ -1.46
HOXC9P31274 MIR4660-201ENST00000583549 74 ntBASIC5.92□□□□□ -1.46
HOXC9P31274 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC5.92□□□□□ -1.46
HOXC9P31274 SNX18P1Y-201ENST00000616231 511 ntBASIC5.92□□□□□ -1.46
HOXC9P31274 HPVC1-201ENST00000629899 1198 ntBASIC5.92□□□□□ -1.46
HOXC9P31274 AC091948.2-201ENST00000636510 279 ntBASIC5.92□□□□□ -1.46
HOXC9P31274 AL163152.1-201ENST00000642001 374 ntBASIC5.92□□□□□ -1.46
HOXC9P31274 A2MP1-204ENST00000566278 4130 ntBASIC5.92□□□□□ -1.46
HOXC9P31274 AC093297.3-201ENST00000607056 2517 ntBASIC5.92□□□□□ -1.46
HOXC9P31274 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.92□□□□□ -1.46
HOXC9P31274 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.92□□□□□ -1.46
HOXC9P31274 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HOXC9P31274 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HOXC9P31274 LARP1BP1-201ENST00000506036 1359 ntBASIC5.92□□□□□ -1.46
HOXC9P31274 AC139769.1-204ENST00000472297 1931 ntBASIC5.91□□□□□ -1.46
HOXC9P31274 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HOXC9P31274 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.91□□□□□ -1.46
HOXC9P31274 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC5.91□□□□□ -1.46
HOXC9P31274 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HOXC9P31274 OR56B2P-201ENST00000317102 954 ntBASIC5.91□□□□□ -1.46
HOXC9P31274 MIR133A2-201ENST00000347538 102 ntBASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms