Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AC073869.6-201ENST00000640656 341 ntBASIC5.89□□□□□ -1.47
COL6A2P12110 AC099063.3-201ENST00000642066 185 ntBASIC5.89□□□□□ -1.47
COL6A2P12110 PPBPP2-201ENST00000513150 1362 ntBASIC5.89□□□□□ -1.47
COL6A2P12110 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
COL6A2P12110 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
COL6A2P12110 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC5.89□□□□□ -1.47
COL6A2P12110 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
COL6A2P12110 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
COL6A2P12110 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.89□□□□□ -1.47
COL6A2P12110 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.89□□□□□ -1.47
COL6A2P12110 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
COL6A2P12110 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
COL6A2P12110 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
COL6A2P12110 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.88□□□□□ -1.47
COL6A2P12110 MRRFP1-201ENST00000435941 1675 ntBASIC5.88□□□□□ -1.47
COL6A2P12110 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
COL6A2P12110 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.88□□□□□ -1.47
COL6A2P12110 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
COL6A2P12110 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.88□□□□□ -1.47
COL6A2P12110 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
COL6A2P12110 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
COL6A2P12110 MIR217-201ENST00000384817 110 ntBASIC5.88□□□□□ -1.47
COL6A2P12110 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
COL6A2P12110 SLC9B1P2-201ENST00000398120 1184 ntBASIC5.88□□□□□ -1.47
COL6A2P12110 RNU6ATAC25P-201ENST00000408798 117 ntBASIC5.88□□□□□ -1.47
COL6A2P12110 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.88□□□□□ -1.47
COL6A2P12110 RPL23AP39-201ENST00000415533 405 ntBASIC5.88□□□□□ -1.47
COL6A2P12110 AC130360.1-201ENST00000425489 1117 ntBASIC5.88□□□□□ -1.47
COL6A2P12110 PSMD10P2-201ENST00000432890 672 ntBASIC5.88□□□□□ -1.47
COL6A2P12110 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.88□□□□□ -1.47
COL6A2P12110 TRBV8-2-201ENST00000475637 270 ntBASIC5.88□□□□□ -1.47
COL6A2P12110 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.88□□□□□ -1.47
COL6A2P12110 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC5.88□□□□□ -1.47
COL6A2P12110 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
COL6A2P12110 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.88□□□□□ -1.47
COL6A2P12110 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.88□□□□□ -1.47
COL6A2P12110 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.88□□□□□ -1.47
COL6A2P12110 ATP1B1P1-201ENST00000509767 915 ntBASIC5.88□□□□□ -1.47
COL6A2P12110 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.88□□□□□ -1.47
COL6A2P12110 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
COL6A2P12110 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.88□□□□□ -1.47
COL6A2P12110 RN7SKP31-201ENST00000516354 278 ntBASIC5.88□□□□□ -1.47
COL6A2P12110 IGHV7-34-1-201ENST00000519200 350 ntBASIC5.88□□□□□ -1.47
COL6A2P12110 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC5.88□□□□□ -1.47
COL6A2P12110 AC130365.2-201ENST00000525882 1201 ntBASIC5.88□□□□□ -1.47
COL6A2P12110 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.88□□□□□ -1.47
COL6A2P12110 AL121834.1-201ENST00000572284 509 ntBASIC5.88□□□□□ -1.47
COL6A2P12110 BPTFP1-201ENST00000579209 492 ntBASIC5.88□□□□□ -1.47
COL6A2P12110 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.88□□□□□ -1.47
COL6A2P12110 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC5.88□□□□□ -1.47
COL6A2P12110 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.88□□□□□ -1.47
COL6A2P12110 AC005962.2-201ENST00000611427 652 ntBASIC5.88□□□□□ -1.47
COL6A2P12110 AL355073.2-201ENST00000612106 557 ntBASIC5.88□□□□□ -1.47
COL6A2P12110 AC010678.1-201ENST00000614118 713 ntBASIC5.88□□□□□ -1.47
COL6A2P12110 U6atac.1-201ENST00000616025 117 ntBASIC5.88□□□□□ -1.47
COL6A2P12110 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.88□□□□□ -1.47
COL6A2P12110 AL356274.1-201ENST00000617064 410 ntBASIC5.88□□□□□ -1.47
COL6A2P12110 AC015804.1-201ENST00000622935 435 ntBASIC5.88□□□□□ -1.47
COL6A2P12110 AC079776.5-201ENST00000641920 211 ntBASIC5.88□□□□□ -1.47
COL6A2P12110 DCAF13P3-201ENST00000561147 1334 ntBASIC5.88□□□□□ -1.47
COL6A2P12110 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
COL6A2P12110 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
COL6A2P12110 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
COL6A2P12110 Z99496.1-201ENST00000469424 1477 ntBASIC5.88□□□□□ -1.47
COL6A2P12110 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
COL6A2P12110 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.88□□□□□ -1.47
COL6A2P12110 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
COL6A2P12110 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
COL6A2P12110 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
COL6A2P12110 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
COL6A2P12110 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.88□□□□□ -1.47
COL6A2P12110 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
COL6A2P12110 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
COL6A2P12110 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
COL6A2P12110 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
COL6A2P12110 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
COL6A2P12110 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.87□□□□□ -1.47
COL6A2P12110 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
COL6A2P12110 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
COL6A2P12110 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
COL6A2P12110 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
COL6A2P12110 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
COL6A2P12110 RNU4-91P-201ENST00000364778 135 ntBASIC5.87□□□□□ -1.47
COL6A2P12110 RN7SKP81-201ENST00000365603 331 ntBASIC5.87□□□□□ -1.47
COL6A2P12110 Y_RNA.408-201ENST00000383987 102 ntBASIC5.87□□□□□ -1.47
COL6A2P12110 U3.28-201ENST00000391249 210 ntBASIC5.87□□□□□ -1.47
COL6A2P12110 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
COL6A2P12110 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.87□□□□□ -1.47
COL6A2P12110 AL512430.2-201ENST00000406786 339 ntBASIC5.87□□□□□ -1.47
COL6A2P12110 SNORA11.3-201ENST00000408471 128 ntBASIC5.87□□□□□ -1.47
COL6A2P12110 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC5.87□□□□□ -1.47
COL6A2P12110 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
COL6A2P12110 Z93242.1-201ENST00000427102 353 ntBASIC5.87□□□□□ -1.47
COL6A2P12110 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
COL6A2P12110 OFD1P13Y-201ENST00000431179 1232 ntBASIC5.87□□□□□ -1.47
COL6A2P12110 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.87□□□□□ -1.47
COL6A2P12110 CACYBPP1-201ENST00000438592 684 ntBASIC5.87□□□□□ -1.47
COL6A2P12110 AL663074.2-201ENST00000440621 479 ntBASIC5.87□□□□□ -1.47
COL6A2P12110 AC245291.3-201ENST00000443400 292 ntBASIC5.87□□□□□ -1.47
COL6A2P12110 AC234771.2-201ENST00000445718 597 ntBASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms