Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 VN1R32P-201ENST00000452234 905 ntBASIC5.01□□□□□ -1.61
TPM1P09493 COPS8P2-201ENST00000473228 627 ntBASIC5.01□□□□□ -1.61
TPM1P09493 RN7SL174P-201ENST00000475578 289 ntBASIC5.01□□□□□ -1.61
TPM1P09493 GAPDHP56-201ENST00000506031 988 ntBASIC5.01□□□□□ -1.61
TPM1P09493 NPM1P6-201ENST00000521088 871 ntBASIC5.01□□□□□ -1.61
TPM1P09493 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC5.01□□□□□ -1.61
TPM1P09493 AC013701.1-201ENST00000522657 465 ntBASIC5.01□□□□□ -1.61
TPM1P09493 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.01□□□□□ -1.61
TPM1P09493 CYP4A43P-201ENST00000568156 121 ntBASIC5.01□□□□□ -1.61
TPM1P09493 FAM106CP-201ENST00000582212 507 ntBASIC5.01□□□□□ -1.61
TPM1P09493 AC006116.3-201ENST00000592968 361 ntBASIC5.01□□□□□ -1.61
TPM1P09493 AP000864.1-201ENST00000609424 650 ntBASIC5.01□□□□□ -1.61
TPM1P09493 AC026368.1-201ENST00000614934 690 ntBASIC5.01□□□□□ -1.61
TPM1P09493 LINC01739-205ENST00000641890 573 ntBASIC5.01□□□□□ -1.61
TPM1P09493 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TPM1P09493 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
TPM1P09493 ASNSP1-201ENST00000518311 1939 ntBASIC5.01□□□□□ -1.61
TPM1P09493 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC5.01□□□□□ -1.61
TPM1P09493 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
TPM1P09493 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
TPM1P09493 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
TPM1P09493 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC5□□□□□ -1.61
TPM1P09493 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC5□□□□□ -1.61
TPM1P09493 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
TPM1P09493 AC093719.1-202ENST00000392735 373 ntBASIC5□□□□□ -1.61
TPM1P09493 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
TPM1P09493 AL078604.1-201ENST00000404609 466 ntBASIC5□□□□□ -1.61
TPM1P09493 AL136131.1-201ENST00000406079 803 ntBASIC5□□□□□ -1.61
TPM1P09493 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC5□□□□□ -1.61
TPM1P09493 CHEK2P3-201ENST00000416118 248 ntBASIC5□□□□□ -1.61
TPM1P09493 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC5□□□□□ -1.61
TPM1P09493 AC073335.1-201ENST00000427776 363 ntBASIC5□□□□□ -1.61
TPM1P09493 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5□□□□□ -1.61
TPM1P09493 CNOT7P2-201ENST00000441051 832 ntBASIC5□□□□□ -1.61
TPM1P09493 ISCUP1-201ENST00000454451 448 ntBASIC5□□□□□ -1.61
TPM1P09493 AC092905.1-201ENST00000467527 949 ntBASIC5□□□□□ -1.61
TPM1P09493 RPL23AP2-201ENST00000471227 466 ntBASIC5□□□□□ -1.61
TPM1P09493 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5□□□□□ -1.61
TPM1P09493 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5□□□□□ -1.61
TPM1P09493 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5□□□□□ -1.61
TPM1P09493 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5□□□□□ -1.61
TPM1P09493 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5□□□□□ -1.61
TPM1P09493 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC5□□□□□ -1.61
TPM1P09493 PDCD5P1-201ENST00000543528 309 ntBASIC5□□□□□ -1.61
TPM1P09493 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5□□□□□ -1.61
TPM1P09493 AC103792.1-201ENST00000603591 919 ntBASIC5□□□□□ -1.61
TPM1P09493 AL121612.2-201ENST00000612261 482 ntBASIC5□□□□□ -1.61
TPM1P09493 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC5□□□□□ -1.61
TPM1P09493 AC021106.3-201ENST00000623925 531 ntBASIC5□□□□□ -1.61
TPM1P09493 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5□□□□□ -1.61
TPM1P09493 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5□□□□□ -1.61
TPM1P09493 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
TPM1P09493 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5□□□□□ -1.61
TPM1P09493 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC5□□□□□ -1.61
TPM1P09493 SAMMSON-226ENST00000642089 1582 ntBASIC4.99□□□□□ -1.61
TPM1P09493 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
TPM1P09493 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
TPM1P09493 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.99□□□□□ -1.61
TPM1P09493 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.99□□□□□ -1.61
TPM1P09493 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
TPM1P09493 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.99□□□□□ -1.61
TPM1P09493 AC067945.1-201ENST00000342609 618 ntBASIC4.99□□□□□ -1.61
TPM1P09493 RNA5SP502-201ENST00000362694 119 ntBASIC4.99□□□□□ -1.61
TPM1P09493 SNORA74A-201ENST00000364089 198 ntBASIC4.99□□□□□ -1.61
TPM1P09493 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
TPM1P09493 RNU1-63P-201ENST00000383902 164 ntBASIC4.99□□□□□ -1.61
TPM1P09493 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
TPM1P09493 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.99□□□□□ -1.61
TPM1P09493 AC099336.2-201ENST00000422457 254 ntBASIC4.99□□□□□ -1.61
TPM1P09493 AL451050.1-201ENST00000450126 415 ntBASIC4.99□□□□□ -1.61
TPM1P09493 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.99□□□□□ -1.61
TPM1P09493 AC099560.2-201ENST00000457554 255 ntBASIC4.99□□□□□ -1.61
TPM1P09493 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.99□□□□□ -1.61
TPM1P09493 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.99□□□□□ -1.61
TPM1P09493 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC4.99□□□□□ -1.61
TPM1P09493 ATP5LP3-201ENST00000514223 304 ntBASIC4.99□□□□□ -1.61
TPM1P09493 HNRNPKP5-201ENST00000515300 253 ntBASIC4.99□□□□□ -1.61
TPM1P09493 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC4.99□□□□□ -1.61
TPM1P09493 MORF4L1P3-201ENST00000525966 950 ntBASIC4.99□□□□□ -1.61
TPM1P09493 OR5M7P-201ENST00000526140 972 ntBASIC4.99□□□□□ -1.61
TPM1P09493 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
TPM1P09493 RN7SL652P-201ENST00000577769 300 ntBASIC4.99□□□□□ -1.61
TPM1P09493 AC011453.2-201ENST00000603737 729 ntBASIC4.99□□□□□ -1.61
TPM1P09493 CASC19-222ENST00000641321 1173 ntBASIC4.99□□□□□ -1.61
TPM1P09493 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
TPM1P09493 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.99□□□□□ -1.61
TPM1P09493 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
TPM1P09493 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.98□□□□□ -1.61
TPM1P09493 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
TPM1P09493 NXPH1-205ENST00000602349 1953 ntBASIC4.98□□□□□ -1.61
TPM1P09493 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
TPM1P09493 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
TPM1P09493 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.98□□□□□ -1.61
TPM1P09493 HSPD1P11-201ENST00000508643 1702 ntBASIC4.98□□□□□ -1.61
TPM1P09493 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.98□□□□□ -1.61
TPM1P09493 RN7SKP95-201ENST00000362860 303 ntBASIC4.98□□□□□ -1.61
TPM1P09493 RNA5SP513-201ENST00000364648 118 ntBASIC4.98□□□□□ -1.61
TPM1P09493 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
TPM1P09493 MIR513A2-201ENST00000385249 127 ntBASIC4.98□□□□□ -1.61
TPM1P09493 RNA5SP105-201ENST00000391123 113 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms