Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CD4P01730 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CD4P01730 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC5.6□□□□□ -1.51
CD4P01730 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.6□□□□□ -1.51
CD4P01730 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.6□□□□□ -1.51
CD4P01730 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CD4P01730 AC098483.2-201ENST00000603158 454 ntBASIC5.6□□□□□ -1.51
CD4P01730 AC090525.3-201ENST00000605601 189 ntBASIC5.6□□□□□ -1.51
CD4P01730 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.6□□□□□ -1.51
CD4P01730 AC139769.3-201ENST00000618383 175 ntBASIC5.6□□□□□ -1.51
CD4P01730 AC091932.2-201ENST00000623014 291 ntBASIC5.6□□□□□ -1.51
CD4P01730 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.6□□□□□ -1.51
CD4P01730 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CD4P01730 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CD4P01730 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CD4P01730 ADAM24P-201ENST00000398655 2101 ntBASIC5.6□□□□□ -1.51
CD4P01730 PHKBP1-201ENST00000450951 1951 ntBASIC5.6□□□□□ -1.51
CD4P01730 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
CD4P01730 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.6□□□□□ -1.51
CD4P01730 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC5.6□□□□□ -1.51
CD4P01730 AL603750.1-201ENST00000624216 1717 ntBASIC5.6□□□□□ -1.51
CD4P01730 AP000756.2-201ENST00000624168 2567 ntBASIC5.6□□□□□ -1.51
CD4P01730 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CD4P01730 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.59□□□□□ -1.51
CD4P01730 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CD4P01730 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.59□□□□□ -1.51
CD4P01730 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CD4P01730 AC006210.2-201ENST00000367074 1545 ntBASIC5.59□□□□□ -1.51
CD4P01730 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.51
CD4P01730 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC5.59□□□□□ -1.51
CD4P01730 GTF2H2B-203ENST00000508065 1432 ntBASIC5.59□□□□□ -1.51
CD4P01730 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CD4P01730 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
CD4P01730 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CD4P01730 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.59□□□□□ -1.51
CD4P01730 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CD4P01730 RPS3AP23-201ENST00000401762 784 ntBASIC5.59□□□□□ -1.51
CD4P01730 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.59□□□□□ -1.51
CD4P01730 PTGES3P2-201ENST00000407942 482 ntBASIC5.59□□□□□ -1.51
CD4P01730 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.59□□□□□ -1.51
CD4P01730 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.59□□□□□ -1.51
CD4P01730 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC5.59□□□□□ -1.51
CD4P01730 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.59□□□□□ -1.51
CD4P01730 AC093414.1-201ENST00000434712 514 ntBASIC5.59□□□□□ -1.51
CD4P01730 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.59□□□□□ -1.51
CD4P01730 MED28P3-201ENST00000444288 531 ntBASIC5.59□□□□□ -1.51
CD4P01730 AC069540.1-201ENST00000446320 988 ntBASIC5.59□□□□□ -1.51
CD4P01730 AL591363.1-201ENST00000450091 483 ntBASIC5.59□□□□□ -1.51
CD4P01730 snoU13.1-201ENST00000459157 104 ntBASIC5.59□□□□□ -1.51
CD4P01730 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC5.59□□□□□ -1.51
CD4P01730 AC010350.1-201ENST00000504908 231 ntBASIC5.59□□□□□ -1.51
CD4P01730 AC097173.1-201ENST00000505862 819 ntBASIC5.59□□□□□ -1.51
CD4P01730 IGBP1P5-201ENST00000507524 1000 ntBASIC5.59□□□□□ -1.51
CD4P01730 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.59□□□□□ -1.51
CD4P01730 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.59□□□□□ -1.51
CD4P01730 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC5.59□□□□□ -1.51
CD4P01730 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CD4P01730 NPM1P47-201ENST00000560843 856 ntBASIC5.59□□□□□ -1.51
CD4P01730 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.59□□□□□ -1.51
CD4P01730 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.59□□□□□ -1.51
CD4P01730 AC011374.2-201ENST00000607135 526 ntBASIC5.59□□□□□ -1.51
CD4P01730 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC5.59□□□□□ -1.51
CD4P01730 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC5.59□□□□□ -1.51
CD4P01730 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC5.59□□□□□ -1.51
CD4P01730 AC009704.2-201ENST00000618739 483 ntBASIC5.59□□□□□ -1.51
CD4P01730 AC006249.1-201ENST00000621223 471 ntBASIC5.59□□□□□ -1.51
CD4P01730 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CD4P01730 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC5.59□□□□□ -1.51
CD4P01730 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.59□□□□□ -1.51
CD4P01730 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.59□□□□□ -1.51
CD4P01730 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CD4P01730 AL022311.1-201ENST00000623726 19416 ntBASIC5.59□□□□□ -1.51
CD4P01730 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CD4P01730 HSPD1P11-201ENST00000508643 1702 ntBASIC5.59□□□□□ -1.51
CD4P01730 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.59□□□□□ -1.52
CD4P01730 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.52
CD4P01730 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
CD4P01730 SAMMSON-226ENST00000642089 1582 ntBASIC5.59□□□□□ -1.52
CD4P01730 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.52
CD4P01730 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.58□□□□□ -1.52
CD4P01730 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CD4P01730 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
CD4P01730 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC5.58□□□□□ -1.52
CD4P01730 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.58□□□□□ -1.52
CD4P01730 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CD4P01730 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CD4P01730 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CD4P01730 AC090017.1-201ENST00000548612 1779 ntBASIC5.58□□□□□ -1.52
CD4P01730 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.58□□□□□ -1.52
CD4P01730 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CD4P01730 OR1L6-202ENST00000373684 1044 ntBASIC5.58□□□□□ -1.52
CD4P01730 RNU6-178P-201ENST00000384631 104 ntBASIC5.58□□□□□ -1.52
CD4P01730 MIR142-201ENST00000384835 87 ntBASIC5.58□□□□□ -1.52
CD4P01730 RNA5SP241-201ENST00000391326 114 ntBASIC5.58□□□□□ -1.52
CD4P01730 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CD4P01730 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.58□□□□□ -1.52
CD4P01730 LINC01347-201ENST00000417964 355 ntBASIC5.58□□□□□ -1.52
CD4P01730 AF186996.5-201ENST00000418098 904 ntBASIC5.58□□□□□ -1.52
CD4P01730 AL606495.1-201ENST00000422100 813 ntBASIC5.58□□□□□ -1.52
CD4P01730 RPS27AP7-201ENST00000422792 455 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms