Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.76□□□□□ -1.81
SDCBPO00560 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.76□□□□□ -1.81
SDCBPO00560 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
SDCBPO00560 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SDCBPO00560 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SDCBPO00560 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SDCBPO00560 MTHFD2P5-201ENST00000320415 844 ntBASIC3.75□□□□□ -1.81
SDCBPO00560 MIR448-201ENST00000362131 111 ntBASIC3.75□□□□□ -1.81
SDCBPO00560 OR1F12-201ENST00000402365 945 ntBASIC3.75□□□□□ -1.81
SDCBPO00560 RPL31-204ENST00000409038 817 ntTSL 2 BASIC3.75□□□□□ -1.81
SDCBPO00560 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SDCBPO00560 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC3.75□□□□□ -1.81
SDCBPO00560 AL160275.2-201ENST00000412010 394 ntBASIC3.75□□□□□ -1.81
SDCBPO00560 UBTFL3-201ENST00000418934 1024 ntBASIC3.75□□□□□ -1.81
SDCBPO00560 RAD23BP1-201ENST00000421404 1227 ntBASIC3.75□□□□□ -1.81
SDCBPO00560 AC006455.6-201ENST00000426192 893 ntBASIC3.75□□□□□ -1.81
SDCBPO00560 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC3.75□□□□□ -1.81
SDCBPO00560 AC069285.2-201ENST00000440210 275 ntBASIC3.75□□□□□ -1.81
SDCBPO00560 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC3.75□□□□□ -1.81
SDCBPO00560 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC3.75□□□□□ -1.81
SDCBPO00560 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC3.75□□□□□ -1.81
SDCBPO00560 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC3.75□□□□□ -1.81
SDCBPO00560 AC010469.1-201ENST00000463864 576 ntBASIC3.75□□□□□ -1.81
SDCBPO00560 RPL5P30-201ENST00000465511 891 ntBASIC3.75□□□□□ -1.81
SDCBPO00560 UBTFL6-201ENST00000477929 1024 ntBASIC3.75□□□□□ -1.81
SDCBPO00560 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC3.75□□□□□ -1.81
SDCBPO00560 RPL32P9-201ENST00000487963 407 ntBASIC3.75□□□□□ -1.81
SDCBPO00560 NDUFA5P12-201ENST00000503796 343 ntBASIC3.75□□□□□ -1.81
SDCBPO00560 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC3.75□□□□□ -1.81
SDCBPO00560 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.75□□□□□ -1.81
SDCBPO00560 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SDCBPO00560 AC125612.1-201ENST00000547580 377 ntBASIC3.75□□□□□ -1.81
SDCBPO00560 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC3.75□□□□□ -1.81
SDCBPO00560 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC3.75□□□□□ -1.81
SDCBPO00560 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.75□□□□□ -1.81
SDCBPO00560 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC3.75□□□□□ -1.81
SDCBPO00560 BPIFA4P-203ENST00000603168 689 ntBASIC3.75□□□□□ -1.81
SDCBPO00560 AF117829.2-201ENST00000619538 361 ntBASIC3.75□□□□□ -1.81
SDCBPO00560 AC074140.1-201ENST00000621617 208 ntBASIC3.75□□□□□ -1.81
SDCBPO00560 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC3.75□□□□□ -1.81
SDCBPO00560 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SDCBPO00560 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.75□□□□□ -1.81
SDCBPO00560 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SDCBPO00560 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
SDCBPO00560 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SDCBPO00560 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
SDCBPO00560 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
SDCBPO00560 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SDCBPO00560 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SDCBPO00560 AC011266.1-201ENST00000624119 3569 ntBASIC3.74□□□□□ -1.81
SDCBPO00560 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SDCBPO00560 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC3.74□□□□□ -1.81
SDCBPO00560 RNA5SP307-201ENST00000362863 116 ntBASIC3.74□□□□□ -1.81
SDCBPO00560 MIR550A3-201ENST00000390735 95 ntBASIC3.74□□□□□ -1.81
SDCBPO00560 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.74□□□□□ -1.81
SDCBPO00560 RPS23P10-201ENST00000416185 486 ntBASIC3.74□□□□□ -1.81
SDCBPO00560 PRELID3BP10-201ENST00000431957 584 ntBASIC3.74□□□□□ -1.81
SDCBPO00560 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC3.74□□□□□ -1.81
SDCBPO00560 RPL23AP93-201ENST00000440847 484 ntBASIC3.74□□□□□ -1.81
SDCBPO00560 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC3.74□□□□□ -1.81
SDCBPO00560 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC3.74□□□□□ -1.81
SDCBPO00560 AL591363.1-201ENST00000450091 483 ntBASIC3.74□□□□□ -1.81
SDCBPO00560 AC012671.1-201ENST00000451912 203 ntBASIC3.74□□□□□ -1.81
SDCBPO00560 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC3.74□□□□□ -1.81
SDCBPO00560 AC093270.2-201ENST00000486157 792 ntBASIC3.74□□□□□ -1.81
SDCBPO00560 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SDCBPO00560 AC025445.1-201ENST00000502728 300 ntBASIC3.74□□□□□ -1.81
SDCBPO00560 OR7H2P-201ENST00000513483 306 ntBASIC3.74□□□□□ -1.81
SDCBPO00560 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC3.74□□□□□ -1.81
SDCBPO00560 IFITM8P-201ENST00000522529 394 ntBASIC3.74□□□□□ -1.81
SDCBPO00560 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC3.74□□□□□ -1.81
SDCBPO00560 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.74□□□□□ -1.81
SDCBPO00560 AC073091.2-201ENST00000603205 907 ntBASIC3.74□□□□□ -1.81
SDCBPO00560 AL008729.2-201ENST00000606393 473 ntBASIC3.74□□□□□ -1.81
SDCBPO00560 AL021707.7-201ENST00000607991 416 ntBASIC3.74□□□□□ -1.81
SDCBPO00560 AL031666.3-201ENST00000609320 1006 ntBASIC3.74□□□□□ -1.81
SDCBPO00560 LINC01808-202ENST00000641680 1116 ntBASIC3.74□□□□□ -1.81
SDCBPO00560 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SDCBPO00560 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
SDCBPO00560 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
SDCBPO00560 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
SDCBPO00560 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC3.74□□□□□ -1.81
SDCBPO00560 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC3.74□□□□□ -1.81
SDCBPO00560 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
SDCBPO00560 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
SDCBPO00560 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SDCBPO00560 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
SDCBPO00560 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SDCBPO00560 MFSD8-242ENST00000641690 4199 ntBASIC3.73□□□□□ -1.81
SDCBPO00560 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
SDCBPO00560 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
SDCBPO00560 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC3.73□□□□□ -1.81
SDCBPO00560 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SDCBPO00560 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SDCBPO00560 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
SDCBPO00560 SDHCP2-201ENST00000398565 501 ntBASIC3.73□□□□□ -1.81
SDCBPO00560 RN7SKP106-201ENST00000410832 272 ntBASIC3.73□□□□□ -1.81
SDCBPO00560 RPS20P14-201ENST00000412545 360 ntBASIC3.73□□□□□ -1.81
SDCBPO00560 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.73□□□□□ -1.81
SDCBPO00560 RPEP2-201ENST00000432149 701 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms