Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 AP005119.2-201ENST00000579735 1105 ntBASIC4.8□□□□□ -1.64
NEDD8-MDP1E9PL57 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC4.8□□□□□ -1.64
NEDD8-MDP1E9PL57 AL021368.1-201ENST00000607490 540 ntBASIC4.8□□□□□ -1.64
NEDD8-MDP1E9PL57 AC100847.1-201ENST00000611316 481 ntBASIC4.8□□□□□ -1.64
NEDD8-MDP1E9PL57 AL354696.1-201ENST00000614652 497 ntBASIC4.8□□□□□ -1.64
NEDD8-MDP1E9PL57 AL731566.2-201ENST00000618971 317 ntBASIC4.8□□□□□ -1.64
NEDD8-MDP1E9PL57 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.8□□□□□ -1.64
NEDD8-MDP1E9PL57 AC011815.3-201ENST00000624194 473 ntBASIC4.8□□□□□ -1.64
NEDD8-MDP1E9PL57 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NEDD8-MDP1E9PL57 MTCO1P15-201ENST00000529569 1526 ntBASIC4.8□□□□□ -1.64
NEDD8-MDP1E9PL57 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NEDD8-MDP1E9PL57 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.8□□□□□ -1.64
NEDD8-MDP1E9PL57 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NEDD8-MDP1E9PL57 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
NEDD8-MDP1E9PL57 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
NEDD8-MDP1E9PL57 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.79□□□□□ -1.64
NEDD8-MDP1E9PL57 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.79□□□□□ -1.64
NEDD8-MDP1E9PL57 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NEDD8-MDP1E9PL57 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NEDD8-MDP1E9PL57 AC108751.5-201ENST00000492880 1336 ntBASIC4.79□□□□□ -1.64
NEDD8-MDP1E9PL57 ZFRP1-201ENST00000457579 2970 ntBASIC4.79□□□□□ -1.64
NEDD8-MDP1E9PL57 AC017079.1-201ENST00000333650 415 ntBASIC4.79□□□□□ -1.64
NEDD8-MDP1E9PL57 RNU6-152P-201ENST00000384037 107 ntBASIC4.79□□□□□ -1.64
NEDD8-MDP1E9PL57 U3.22-201ENST00000391120 215 ntBASIC4.79□□□□□ -1.64
NEDD8-MDP1E9PL57 OR51B3P-201ENST00000412287 913 ntBASIC4.79□□□□□ -1.64
NEDD8-MDP1E9PL57 E2F6P2-201ENST00000420708 748 ntBASIC4.79□□□□□ -1.64
NEDD8-MDP1E9PL57 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.79□□□□□ -1.64
NEDD8-MDP1E9PL57 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC4.79□□□□□ -1.64
NEDD8-MDP1E9PL57 AL606490.8-201ENST00000441624 319 ntBASIC4.79□□□□□ -1.64
NEDD8-MDP1E9PL57 RAB28P3-201ENST00000448325 597 ntBASIC4.79□□□□□ -1.64
NEDD8-MDP1E9PL57 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
NEDD8-MDP1E9PL57 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC4.79□□□□□ -1.64
NEDD8-MDP1E9PL57 SEC11B-201ENST00000518383 499 ntBASIC4.79□□□□□ -1.64
NEDD8-MDP1E9PL57 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.79□□□□□ -1.64
NEDD8-MDP1E9PL57 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.79□□□□□ -1.64
NEDD8-MDP1E9PL57 EIF4A2P3-201ENST00000525903 1055 ntBASIC4.79□□□□□ -1.64
NEDD8-MDP1E9PL57 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.79□□□□□ -1.64
NEDD8-MDP1E9PL57 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.79□□□□□ -1.64
NEDD8-MDP1E9PL57 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.79□□□□□ -1.64
NEDD8-MDP1E9PL57 AC087477.6-201ENST00000559595 843 ntBASIC4.79□□□□□ -1.64
NEDD8-MDP1E9PL57 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.79□□□□□ -1.64
NEDD8-MDP1E9PL57 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.79□□□□□ -1.64
NEDD8-MDP1E9PL57 AC015802.5-201ENST00000607478 399 ntBASIC4.79□□□□□ -1.64
NEDD8-MDP1E9PL57 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.79□□□□□ -1.64
NEDD8-MDP1E9PL57 OR8G7P-201ENST00000616658 848 ntBASIC4.79□□□□□ -1.64
NEDD8-MDP1E9PL57 AL359757.1-201ENST00000623176 255 ntBASIC4.79□□□□□ -1.64
NEDD8-MDP1E9PL57 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.79□□□□□ -1.64
NEDD8-MDP1E9PL57 CNOT6LP1-201ENST00000559681 1462 ntBASIC4.79□□□□□ -1.64
NEDD8-MDP1E9PL57 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NEDD8-MDP1E9PL57 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NEDD8-MDP1E9PL57 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NEDD8-MDP1E9PL57 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
NEDD8-MDP1E9PL57 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NEDD8-MDP1E9PL57 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.79□□□□□ -1.64
NEDD8-MDP1E9PL57 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.79□□□□□ -1.64
NEDD8-MDP1E9PL57 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.79□□□□□ -1.64
NEDD8-MDP1E9PL57 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.79□□□□□ -1.64
NEDD8-MDP1E9PL57 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NEDD8-MDP1E9PL57 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NEDD8-MDP1E9PL57 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
NEDD8-MDP1E9PL57 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NEDD8-MDP1E9PL57 AC011503.2-201ENST00000594230 1500 ntBASIC4.78□□□□□ -1.64
NEDD8-MDP1E9PL57 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.78□□□□□ -1.64
NEDD8-MDP1E9PL57 AL121950.1-201ENST00000624993 2077 ntBASIC4.78□□□□□ -1.64
NEDD8-MDP1E9PL57 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
NEDD8-MDP1E9PL57 RNA5SP447-201ENST00000363749 119 ntBASIC4.78□□□□□ -1.64
NEDD8-MDP1E9PL57 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NEDD8-MDP1E9PL57 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
NEDD8-MDP1E9PL57 SEPT7P8-201ENST00000413308 775 ntBASIC4.78□□□□□ -1.64
NEDD8-MDP1E9PL57 VN1R37P-201ENST00000419096 748 ntBASIC4.78□□□□□ -1.64
NEDD8-MDP1E9PL57 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.78□□□□□ -1.64
NEDD8-MDP1E9PL57 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC4.78□□□□□ -1.64
NEDD8-MDP1E9PL57 RPL12P28-201ENST00000430852 489 ntBASIC4.78□□□□□ -1.64
NEDD8-MDP1E9PL57 AC091390.1-201ENST00000433904 331 ntBASIC4.78□□□□□ -1.64
NEDD8-MDP1E9PL57 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC4.78□□□□□ -1.64
NEDD8-MDP1E9PL57 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.78□□□□□ -1.64
NEDD8-MDP1E9PL57 AC114878.1-201ENST00000441166 358 ntBASIC4.78□□□□□ -1.64
NEDD8-MDP1E9PL57 TPT1P1-201ENST00000458495 518 ntBASIC4.78□□□□□ -1.64
NEDD8-MDP1E9PL57 RN7SL385P-201ENST00000468873 276 ntBASIC4.78□□□□□ -1.64
NEDD8-MDP1E9PL57 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.78□□□□□ -1.64
NEDD8-MDP1E9PL57 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.78□□□□□ -1.64
NEDD8-MDP1E9PL57 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.78□□□□□ -1.64
NEDD8-MDP1E9PL57 AC093267.1-201ENST00000489176 961 ntBASIC4.78□□□□□ -1.64
NEDD8-MDP1E9PL57 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.78□□□□□ -1.64
NEDD8-MDP1E9PL57 AC026979.1-201ENST00000492525 396 ntBASIC4.78□□□□□ -1.64
NEDD8-MDP1E9PL57 AC025164.1-201ENST00000496249 478 ntBASIC4.78□□□□□ -1.64
NEDD8-MDP1E9PL57 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.78□□□□□ -1.64
NEDD8-MDP1E9PL57 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.78□□□□□ -1.64
NEDD8-MDP1E9PL57 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.78□□□□□ -1.64
NEDD8-MDP1E9PL57 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.78□□□□□ -1.64
NEDD8-MDP1E9PL57 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.78□□□□□ -1.64
NEDD8-MDP1E9PL57 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.78□□□□□ -1.64
NEDD8-MDP1E9PL57 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.78□□□□□ -1.64
NEDD8-MDP1E9PL57 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC4.78□□□□□ -1.64
NEDD8-MDP1E9PL57 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.78□□□□□ -1.64
NEDD8-MDP1E9PL57 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC4.78□□□□□ -1.64
NEDD8-MDP1E9PL57 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.78□□□□□ -1.64
NEDD8-MDP1E9PL57 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
NEDD8-MDP1E9PL57 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.78□□□□□ -1.64
NEDD8-MDP1E9PL57 CYCSP40-201ENST00000575927 294 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms