Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
TRIM49D1C9J1S8 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
TRIM49D1C9J1S8 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
TRIM49D1C9J1S8 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
TRIM49D1C9J1S8 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.44□□□□□ -1.7
TRIM49D1C9J1S8 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
TRIM49D1C9J1S8 SNORA51.8-201ENST00000384234 132 ntBASIC4.44□□□□□ -1.7
TRIM49D1C9J1S8 SNORA79B-201ENST00000410557 148 ntBASIC4.44□□□□□ -1.7
TRIM49D1C9J1S8 AL160275.2-201ENST00000412010 394 ntBASIC4.44□□□□□ -1.7
TRIM49D1C9J1S8 RPS23P10-201ENST00000416185 486 ntBASIC4.44□□□□□ -1.7
TRIM49D1C9J1S8 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.44□□□□□ -1.7
TRIM49D1C9J1S8 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.44□□□□□ -1.7
TRIM49D1C9J1S8 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.44□□□□□ -1.7
TRIM49D1C9J1S8 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.44□□□□□ -1.7
TRIM49D1C9J1S8 AL034379.1-201ENST00000423216 253 ntBASIC4.44□□□□□ -1.7
TRIM49D1C9J1S8 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.44□□□□□ -1.7
TRIM49D1C9J1S8 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC4.44□□□□□ -1.7
TRIM49D1C9J1S8 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.44□□□□□ -1.7
TRIM49D1C9J1S8 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
TRIM49D1C9J1S8 TPTE2P1-204ENST00000435256 593 ntBASIC4.44□□□□□ -1.7
TRIM49D1C9J1S8 ARAFP2-201ENST00000440565 559 ntBASIC4.44□□□□□ -1.7
TRIM49D1C9J1S8 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC4.44□□□□□ -1.7
TRIM49D1C9J1S8 RPL23AP43-201ENST00000446445 471 ntBASIC4.44□□□□□ -1.7
TRIM49D1C9J1S8 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.44□□□□□ -1.7
TRIM49D1C9J1S8 AL645937.3-201ENST00000453647 936 ntBASIC4.44□□□□□ -1.7
TRIM49D1C9J1S8 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.44□□□□□ -1.7
TRIM49D1C9J1S8 RPS6P2-201ENST00000454208 705 ntBASIC4.44□□□□□ -1.7
TRIM49D1C9J1S8 AC093270.2-201ENST00000486157 792 ntBASIC4.44□□□□□ -1.7
TRIM49D1C9J1S8 AC006499.6-201ENST00000511169 607 ntBASIC4.44□□□□□ -1.7
TRIM49D1C9J1S8 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.44□□□□□ -1.7
TRIM49D1C9J1S8 IFITM8P-201ENST00000522529 394 ntBASIC4.44□□□□□ -1.7
TRIM49D1C9J1S8 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
TRIM49D1C9J1S8 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.44□□□□□ -1.7
TRIM49D1C9J1S8 AC069240.1-201ENST00000548774 375 ntBASIC4.44□□□□□ -1.7
TRIM49D1C9J1S8 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.44□□□□□ -1.7
TRIM49D1C9J1S8 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.44□□□□□ -1.7
TRIM49D1C9J1S8 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.44□□□□□ -1.7
TRIM49D1C9J1S8 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
TRIM49D1C9J1S8 AC005034.4-201ENST00000603612 899 ntBASIC4.44□□□□□ -1.7
TRIM49D1C9J1S8 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.44□□□□□ -1.7
TRIM49D1C9J1S8 AC015813.4-201ENST00000610469 179 ntBASIC4.44□□□□□ -1.7
TRIM49D1C9J1S8 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC4.44□□□□□ -1.7
TRIM49D1C9J1S8 AC002044.3-201ENST00000623314 541 ntBASIC4.44□□□□□ -1.7
TRIM49D1C9J1S8 AC006065.6-201ENST00000625201 545 ntBASIC4.44□□□□□ -1.7
TRIM49D1C9J1S8 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
TRIM49D1C9J1S8 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
TRIM49D1C9J1S8 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
TRIM49D1C9J1S8 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
TRIM49D1C9J1S8 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
TRIM49D1C9J1S8 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
TRIM49D1C9J1S8 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
TRIM49D1C9J1S8 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
TRIM49D1C9J1S8 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
TRIM49D1C9J1S8 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
TRIM49D1C9J1S8 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.43□□□□□ -1.7
TRIM49D1C9J1S8 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
TRIM49D1C9J1S8 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
TRIM49D1C9J1S8 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
TRIM49D1C9J1S8 MIR137-201ENST00000385223 102 ntBASIC4.43□□□□□ -1.7
TRIM49D1C9J1S8 MIR513A2-201ENST00000385249 127 ntBASIC4.43□□□□□ -1.7
TRIM49D1C9J1S8 AL645927.1-201ENST00000396783 406 ntBASIC4.43□□□□□ -1.7
TRIM49D1C9J1S8 SDHCP2-201ENST00000398565 501 ntBASIC4.43□□□□□ -1.7
TRIM49D1C9J1S8 MIR1911-201ENST00000410783 80 ntBASIC4.43□□□□□ -1.7
TRIM49D1C9J1S8 RPS20P14-201ENST00000412545 360 ntBASIC4.43□□□□□ -1.7
TRIM49D1C9J1S8 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
TRIM49D1C9J1S8 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC4.43□□□□□ -1.7
TRIM49D1C9J1S8 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.43□□□□□ -1.7
TRIM49D1C9J1S8 AL049745.1-201ENST00000433953 286 ntBASIC4.43□□□□□ -1.7
TRIM49D1C9J1S8 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC4.43□□□□□ -1.7
TRIM49D1C9J1S8 UBE2V1P3-201ENST00000439651 417 ntBASIC4.43□□□□□ -1.7
TRIM49D1C9J1S8 CEACAMP7-201ENST00000444105 496 ntBASIC4.43□□□□□ -1.7
TRIM49D1C9J1S8 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.43□□□□□ -1.7
TRIM49D1C9J1S8 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.43□□□□□ -1.7
TRIM49D1C9J1S8 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.43□□□□□ -1.7
TRIM49D1C9J1S8 RPS27AP17-201ENST00000463344 455 ntBASIC4.43□□□□□ -1.7
TRIM49D1C9J1S8 IGLV2-34-201ENST00000490007 283 ntBASIC4.43□□□□□ -1.7
TRIM49D1C9J1S8 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.43□□□□□ -1.7
TRIM49D1C9J1S8 AC147055.3-201ENST00000510547 851 ntBASIC4.43□□□□□ -1.7
TRIM49D1C9J1S8 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.43□□□□□ -1.7
TRIM49D1C9J1S8 RNA5SP154-201ENST00000516193 111 ntBASIC4.43□□□□□ -1.7
TRIM49D1C9J1S8 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.43□□□□□ -1.7
TRIM49D1C9J1S8 PHBP17-201ENST00000528576 541 ntBASIC4.43□□□□□ -1.7
TRIM49D1C9J1S8 AC124068.1-201ENST00000563131 678 ntBASIC4.43□□□□□ -1.7
TRIM49D1C9J1S8 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC4.43□□□□□ -1.7
TRIM49D1C9J1S8 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.43□□□□□ -1.7
TRIM49D1C9J1S8 AL031320.1-201ENST00000604177 357 ntBASIC4.43□□□□□ -1.7
TRIM49D1C9J1S8 AL133338.2-201ENST00000604292 736 ntBASIC4.43□□□□□ -1.7
TRIM49D1C9J1S8 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC4.43□□□□□ -1.7
TRIM49D1C9J1S8 AC009237.17-201ENST00000618111 748 ntBASIC4.43□□□□□ -1.7
TRIM49D1C9J1S8 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC4.43□□□□□ -1.7
TRIM49D1C9J1S8 LINC01808-202ENST00000641680 1116 ntBASIC4.43□□□□□ -1.7
TRIM49D1C9J1S8 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.43□□□□□ -1.7
TRIM49D1C9J1S8 AC010928.1-201ENST00000592477 1447 ntBASIC4.43□□□□□ -1.7
TRIM49D1C9J1S8 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.43□□□□□ -1.7
TRIM49D1C9J1S8 OR14L1P-202ENST00000641545 3009 ntBASIC4.43□□□□□ -1.7
TRIM49D1C9J1S8 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
TRIM49D1C9J1S8 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC4.42□□□□□ -1.7
TRIM49D1C9J1S8 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.42□□□□□ -1.7
TRIM49D1C9J1S8 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC4.42□□□□□ -1.7
TRIM49D1C9J1S8 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms