Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 AL353692.2-201ENST00000407054 335 ntBASIC5.26□□□□□ -1.57
SNX9Q9Y5X1 AL139128.1-201ENST00000413921 941 ntBASIC5.26□□□□□ -1.57
SNX9Q9Y5X1 SFR1P2-201ENST00000421841 730 ntBASIC5.26□□□□□ -1.57
SNX9Q9Y5X1 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.26□□□□□ -1.57
SNX9Q9Y5X1 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.26□□□□□ -1.57
SNX9Q9Y5X1 ELOCP3-201ENST00000439303 348 ntBASIC5.26□□□□□ -1.57
SNX9Q9Y5X1 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC5.26□□□□□ -1.57
SNX9Q9Y5X1 AC007000.2-201ENST00000442564 487 ntBASIC5.26□□□□□ -1.57
SNX9Q9Y5X1 RAB28P3-201ENST00000448325 597 ntBASIC5.26□□□□□ -1.57
SNX9Q9Y5X1 SLC25A18P1-201ENST00000449385 454 ntBASIC5.26□□□□□ -1.57
SNX9Q9Y5X1 NPM1P39-201ENST00000449818 867 ntBASIC5.26□□□□□ -1.57
SNX9Q9Y5X1 AC091685.2-201ENST00000454924 864 ntBASIC5.26□□□□□ -1.57
SNX9Q9Y5X1 TVP23BP2-201ENST00000455082 615 ntBASIC5.26□□□□□ -1.57
SNX9Q9Y5X1 AP002345.1-201ENST00000456493 928 ntBASIC5.26□□□□□ -1.57
SNX9Q9Y5X1 ATP5G1P3-201ENST00000463301 410 ntBASIC5.26□□□□□ -1.57
SNX9Q9Y5X1 AC063943.1-201ENST00000465434 453 ntBASIC5.26□□□□□ -1.57
SNX9Q9Y5X1 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.26□□□□□ -1.57
SNX9Q9Y5X1 AC090543.1-201ENST00000492168 485 ntBASIC5.26□□□□□ -1.57
SNX9Q9Y5X1 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.26□□□□□ -1.57
SNX9Q9Y5X1 RNA5SP392-201ENST00000516905 112 ntBASIC5.26□□□□□ -1.57
SNX9Q9Y5X1 AP006245.2-201ENST00000522004 300 ntBASIC5.26□□□□□ -1.57
SNX9Q9Y5X1 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC5.26□□□□□ -1.57
SNX9Q9Y5X1 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.26□□□□□ -1.57
SNX9Q9Y5X1 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
SNX9Q9Y5X1 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SNX9Q9Y5X1 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC5.26□□□□□ -1.57
SNX9Q9Y5X1 BGLT3-201ENST00000564523 994 ntBASIC5.26□□□□□ -1.57
SNX9Q9Y5X1 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SNX9Q9Y5X1 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC5.26□□□□□ -1.57
SNX9Q9Y5X1 AC127024.5-201ENST00000580085 462 ntBASIC5.26□□□□□ -1.57
SNX9Q9Y5X1 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.26□□□□□ -1.57
SNX9Q9Y5X1 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
SNX9Q9Y5X1 AC104687.2-201ENST00000604442 342 ntBASIC5.26□□□□□ -1.57
SNX9Q9Y5X1 AC017076.1-201ENST00000607613 578 ntBASIC5.26□□□□□ -1.57
SNX9Q9Y5X1 AC016597.2-201ENST00000613256 341 ntBASIC5.26□□□□□ -1.57
SNX9Q9Y5X1 AC100827.5-201ENST00000615883 426 ntBASIC5.26□□□□□ -1.57
SNX9Q9Y5X1 AL138955.1-201ENST00000622881 1040 ntBASIC5.26□□□□□ -1.57
SNX9Q9Y5X1 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
SNX9Q9Y5X1 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.26□□□□□ -1.57
SNX9Q9Y5X1 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SNX9Q9Y5X1 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
SNX9Q9Y5X1 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SNX9Q9Y5X1 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SNX9Q9Y5X1 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
SNX9Q9Y5X1 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SNX9Q9Y5X1 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.25□□□□□ -1.57
SNX9Q9Y5X1 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SNX9Q9Y5X1 AC103591.2-201ENST00000265259 766 ntBASIC5.25□□□□□ -1.57
SNX9Q9Y5X1 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SNX9Q9Y5X1 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.25□□□□□ -1.57
SNX9Q9Y5X1 RBMY2KP-201ENST00000418221 992 ntBASIC5.25□□□□□ -1.57
SNX9Q9Y5X1 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC5.25□□□□□ -1.57
SNX9Q9Y5X1 RNF19BPX-201ENST00000426224 625 ntBASIC5.25□□□□□ -1.57
SNX9Q9Y5X1 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.25□□□□□ -1.57
SNX9Q9Y5X1 AC008072.1-201ENST00000434254 824 ntBASIC5.25□□□□□ -1.57
SNX9Q9Y5X1 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.25□□□□□ -1.57
SNX9Q9Y5X1 AC006466.1-201ENST00000438721 289 ntBASIC5.25□□□□□ -1.57
SNX9Q9Y5X1 AC000111.2-201ENST00000448200 210 ntBASIC5.25□□□□□ -1.57
SNX9Q9Y5X1 AC234781.3-201ENST00000452540 973 ntBASIC5.25□□□□□ -1.57
SNX9Q9Y5X1 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC5.25□□□□□ -1.57
SNX9Q9Y5X1 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.25□□□□□ -1.57
SNX9Q9Y5X1 AC092324.1-201ENST00000468671 324 ntBASIC5.25□□□□□ -1.57
SNX9Q9Y5X1 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SNX9Q9Y5X1 AC105233.1-201ENST00000498840 781 ntBASIC5.25□□□□□ -1.57
SNX9Q9Y5X1 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.25□□□□□ -1.57
SNX9Q9Y5X1 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC5.25□□□□□ -1.57
SNX9Q9Y5X1 AC110760.3-202ENST00000515177 371 ntBASIC5.25□□□□□ -1.57
SNX9Q9Y5X1 AC103833.1-201ENST00000517442 172 ntBASIC5.25□□□□□ -1.57
SNX9Q9Y5X1 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.25□□□□□ -1.57
SNX9Q9Y5X1 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC5.25□□□□□ -1.57
SNX9Q9Y5X1 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.25□□□□□ -1.57
SNX9Q9Y5X1 FAM106CP-201ENST00000582212 507 ntBASIC5.25□□□□□ -1.57
SNX9Q9Y5X1 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.25□□□□□ -1.57
SNX9Q9Y5X1 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.25□□□□□ -1.57
SNX9Q9Y5X1 AC006116.7-201ENST00000590141 756 ntBASIC5.25□□□□□ -1.57
SNX9Q9Y5X1 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.25□□□□□ -1.57
SNX9Q9Y5X1 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SNX9Q9Y5X1 AC090506.2-201ENST00000624521 419 ntBASIC5.25□□□□□ -1.57
SNX9Q9Y5X1 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.25□□□□□ -1.57
SNX9Q9Y5X1 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC5.25□□□□□ -1.57
SNX9Q9Y5X1 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.25□□□□□ -1.57
SNX9Q9Y5X1 AC104623.2-202ENST00000623477 4002 ntBASIC5.25□□□□□ -1.57
SNX9Q9Y5X1 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
SNX9Q9Y5X1 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.25□□□□□ -1.57
SNX9Q9Y5X1 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
SNX9Q9Y5X1 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.25□□□□□ -1.57
SNX9Q9Y5X1 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SNX9Q9Y5X1 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.24□□□□□ -1.57
SNX9Q9Y5X1 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SNX9Q9Y5X1 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.24□□□□□ -1.57
SNX9Q9Y5X1 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SNX9Q9Y5X1 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
SNX9Q9Y5X1 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.24□□□□□ -1.57
SNX9Q9Y5X1 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
SNX9Q9Y5X1 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SNX9Q9Y5X1 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SNX9Q9Y5X1 RNA5SP191-201ENST00000362585 102 ntBASIC5.24□□□□□ -1.57
SNX9Q9Y5X1 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SNX9Q9Y5X1 AL035419.1-201ENST00000397037 564 ntBASIC5.24□□□□□ -1.57
SNX9Q9Y5X1 ST13P16-201ENST00000401760 781 ntBASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms