Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.58□□□□□ -1.68
ATG4BQ9Y4P1 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.58□□□□□ -1.68
ATG4BQ9Y4P1 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
ATG4BQ9Y4P1 LINC01355-201ENST00000566551 5444 ntBASIC4.58□□□□□ -1.68
ATG4BQ9Y4P1 AL022393.1-201ENST00000625142 1677 ntBASIC4.58□□□□□ -1.68
ATG4BQ9Y4P1 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
ATG4BQ9Y4P1 DDX6P1-205ENST00000441966 1436 ntBASIC4.58□□□□□ -1.68
ATG4BQ9Y4P1 DDX18P5-201ENST00000534547 1306 ntBASIC4.58□□□□□ -1.68
ATG4BQ9Y4P1 AC103591.2-201ENST00000265259 766 ntBASIC4.58□□□□□ -1.68
ATG4BQ9Y4P1 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
ATG4BQ9Y4P1 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
ATG4BQ9Y4P1 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
ATG4BQ9Y4P1 RNA5SP498-201ENST00000411342 120 ntBASIC4.58□□□□□ -1.68
ATG4BQ9Y4P1 MTATP6P19-201ENST00000413797 659 ntBASIC4.58□□□□□ -1.68
ATG4BQ9Y4P1 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.58□□□□□ -1.68
ATG4BQ9Y4P1 RBMY2KP-201ENST00000418221 992 ntBASIC4.58□□□□□ -1.68
ATG4BQ9Y4P1 MTND4LP14-201ENST00000429447 288 ntBASIC4.58□□□□□ -1.68
ATG4BQ9Y4P1 MTCO3P21-201ENST00000430791 643 ntBASIC4.58□□□□□ -1.68
ATG4BQ9Y4P1 MTND4LP7-201ENST00000431728 294 ntBASIC4.58□□□□□ -1.68
ATG4BQ9Y4P1 RPS26P4-201ENST00000431743 355 ntBASIC4.58□□□□□ -1.68
ATG4BQ9Y4P1 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC4.58□□□□□ -1.68
ATG4BQ9Y4P1 AC073648.4-201ENST00000442655 781 ntBASIC4.58□□□□□ -1.68
ATG4BQ9Y4P1 SLC25A18P1-201ENST00000449385 454 ntBASIC4.58□□□□□ -1.68
ATG4BQ9Y4P1 AC234781.3-201ENST00000452540 973 ntBASIC4.58□□□□□ -1.68
ATG4BQ9Y4P1 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.58□□□□□ -1.68
ATG4BQ9Y4P1 RPL7P16-201ENST00000479738 738 ntBASIC4.58□□□□□ -1.68
ATG4BQ9Y4P1 GAPDHP56-201ENST00000506031 988 ntBASIC4.58□□□□□ -1.68
ATG4BQ9Y4P1 HMGB3P16-201ENST00000508037 287 ntBASIC4.58□□□□□ -1.68
ATG4BQ9Y4P1 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.58□□□□□ -1.68
ATG4BQ9Y4P1 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.58□□□□□ -1.68
ATG4BQ9Y4P1 AC021006.3-201ENST00000530771 192 ntBASIC4.58□□□□□ -1.68
ATG4BQ9Y4P1 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.58□□□□□ -1.68
ATG4BQ9Y4P1 AL121932.1-201ENST00000605542 214 ntBASIC4.58□□□□□ -1.68
ATG4BQ9Y4P1 FAM25E-202ENST00000608562 189 ntBASIC4.58□□□□□ -1.68
ATG4BQ9Y4P1 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
ATG4BQ9Y4P1 AC012414.7-202ENST00000622705 1090 ntBASIC4.58□□□□□ -1.68
ATG4BQ9Y4P1 CR381572.2-201ENST00000624852 397 ntBASIC4.58□□□□□ -1.68
ATG4BQ9Y4P1 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
ATG4BQ9Y4P1 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
ATG4BQ9Y4P1 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
ATG4BQ9Y4P1 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.58□□□□□ -1.68
ATG4BQ9Y4P1 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
ATG4BQ9Y4P1 SAMMSON-226ENST00000642089 1582 ntBASIC4.57□□□□□ -1.68
ATG4BQ9Y4P1 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
ATG4BQ9Y4P1 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
ATG4BQ9Y4P1 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
ATG4BQ9Y4P1 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
ATG4BQ9Y4P1 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
ATG4BQ9Y4P1 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.57□□□□□ -1.68
ATG4BQ9Y4P1 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
ATG4BQ9Y4P1 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.57□□□□□ -1.68
ATG4BQ9Y4P1 AC008549.2-201ENST00000333482 706 ntBASIC4.57□□□□□ -1.68
ATG4BQ9Y4P1 RN7SKP149-201ENST00000363008 344 ntBASIC4.57□□□□□ -1.68
ATG4BQ9Y4P1 RN7SKP103-201ENST00000363848 320 ntBASIC4.57□□□□□ -1.68
ATG4BQ9Y4P1 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.57□□□□□ -1.68
ATG4BQ9Y4P1 RANP4-201ENST00000413361 655 ntBASIC4.57□□□□□ -1.68
ATG4BQ9Y4P1 AL139128.1-201ENST00000413921 941 ntBASIC4.57□□□□□ -1.68
ATG4BQ9Y4P1 AC009302.1-201ENST00000417147 390 ntBASIC4.57□□□□□ -1.68
ATG4BQ9Y4P1 EIF4HP2-201ENST00000424380 563 ntBASIC4.57□□□□□ -1.68
ATG4BQ9Y4P1 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC4.57□□□□□ -1.68
ATG4BQ9Y4P1 RPS17P8-201ENST00000434525 335 ntBASIC4.57□□□□□ -1.68
ATG4BQ9Y4P1 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC4.57□□□□□ -1.68
ATG4BQ9Y4P1 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.57□□□□□ -1.68
ATG4BQ9Y4P1 CASP3P1-201ENST00000446037 609 ntBASIC4.57□□□□□ -1.68
ATG4BQ9Y4P1 AL591623.2-201ENST00000449978 222 ntBASIC4.57□□□□□ -1.68
ATG4BQ9Y4P1 AC083982.1-201ENST00000485679 344 ntBASIC4.57□□□□□ -1.68
ATG4BQ9Y4P1 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC4.57□□□□□ -1.68
ATG4BQ9Y4P1 SUMO1P1-201ENST00000497904 306 ntBASIC4.57□□□□□ -1.68
ATG4BQ9Y4P1 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.57□□□□□ -1.68
ATG4BQ9Y4P1 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.57□□□□□ -1.68
ATG4BQ9Y4P1 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.57□□□□□ -1.68
ATG4BQ9Y4P1 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.57□□□□□ -1.68
ATG4BQ9Y4P1 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
ATG4BQ9Y4P1 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.57□□□□□ -1.68
ATG4BQ9Y4P1 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.57□□□□□ -1.68
ATG4BQ9Y4P1 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.57□□□□□ -1.68
ATG4BQ9Y4P1 AC093249.4-201ENST00000564755 259 ntBASIC4.57□□□□□ -1.68
ATG4BQ9Y4P1 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.57□□□□□ -1.68
ATG4BQ9Y4P1 AC242628.1-201ENST00000606810 391 ntBASIC4.57□□□□□ -1.68
ATG4BQ9Y4P1 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.57□□□□□ -1.68
ATG4BQ9Y4P1 AC091953.3-201ENST00000623220 236 ntBASIC4.57□□□□□ -1.68
ATG4BQ9Y4P1 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
ATG4BQ9Y4P1 AC079298.2-201ENST00000623885 459 ntBASIC4.57□□□□□ -1.68
ATG4BQ9Y4P1 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.57□□□□□ -1.68
ATG4BQ9Y4P1 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
ATG4BQ9Y4P1 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
ATG4BQ9Y4P1 AC027290.2-201ENST00000623210 18662 ntBASIC4.57□□□□□ -1.68
ATG4BQ9Y4P1 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
ATG4BQ9Y4P1 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
ATG4BQ9Y4P1 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
ATG4BQ9Y4P1 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.57□□□□□ -1.68
ATG4BQ9Y4P1 AP000542.2-201ENST00000623199 6179 ntBASIC4.57□□□□□ -1.68
ATG4BQ9Y4P1 MAPK10-320ENST00000641462 6696 ntBASIC4.57□□□□□ -1.68
ATG4BQ9Y4P1 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
ATG4BQ9Y4P1 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
ATG4BQ9Y4P1 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
ATG4BQ9Y4P1 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.56□□□□□ -1.68
ATG4BQ9Y4P1 AL731566.1-201ENST00000620490 1937 ntBASIC4.56□□□□□ -1.68
ATG4BQ9Y4P1 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.56□□□□□ -1.68
ATG4BQ9Y4P1 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms