Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
SSX2IPQ9Y2D8 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
SSX2IPQ9Y2D8 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SSX2IPQ9Y2D8 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.71□□□□□ -1.5
SSX2IPQ9Y2D8 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
SSX2IPQ9Y2D8 RNU4-44P-201ENST00000363050 141 ntBASIC5.71□□□□□ -1.5
SSX2IPQ9Y2D8 RN7SKP103-201ENST00000363848 320 ntBASIC5.71□□□□□ -1.5
SSX2IPQ9Y2D8 ATF1P1-201ENST00000406040 927 ntBASIC5.71□□□□□ -1.5
SSX2IPQ9Y2D8 RN7SKP126-201ENST00000411143 300 ntBASIC5.71□□□□□ -1.5
SSX2IPQ9Y2D8 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC5.71□□□□□ -1.5
SSX2IPQ9Y2D8 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC5.71□□□□□ -1.5
SSX2IPQ9Y2D8 PNRC2P1-201ENST00000423940 420 ntBASIC5.71□□□□□ -1.5
SSX2IPQ9Y2D8 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC5.71□□□□□ -1.5
SSX2IPQ9Y2D8 SNRPFP2-201ENST00000440710 251 ntBASIC5.71□□□□□ -1.5
SSX2IPQ9Y2D8 OR10R1P-201ENST00000441524 1141 ntBASIC5.71□□□□□ -1.5
SSX2IPQ9Y2D8 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.71□□□□□ -1.5
SSX2IPQ9Y2D8 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.71□□□□□ -1.5
SSX2IPQ9Y2D8 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.71□□□□□ -1.5
SSX2IPQ9Y2D8 AL591623.2-201ENST00000449978 222 ntBASIC5.71□□□□□ -1.5
SSX2IPQ9Y2D8 OFD1P7Y-201ENST00000454643 1155 ntBASIC5.71□□□□□ -1.5
SSX2IPQ9Y2D8 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.71□□□□□ -1.5
SSX2IPQ9Y2D8 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.71□□□□□ -1.5
SSX2IPQ9Y2D8 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.71□□□□□ -1.5
SSX2IPQ9Y2D8 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC5.71□□□□□ -1.5
SSX2IPQ9Y2D8 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.71□□□□□ -1.5
SSX2IPQ9Y2D8 AC026414.1-201ENST00000504046 698 ntBASIC5.71□□□□□ -1.5
SSX2IPQ9Y2D8 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
SSX2IPQ9Y2D8 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC5.71□□□□□ -1.5
SSX2IPQ9Y2D8 EIF3KP3-201ENST00000514461 639 ntBASIC5.71□□□□□ -1.5
SSX2IPQ9Y2D8 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.71□□□□□ -1.5
SSX2IPQ9Y2D8 OR7E128P-201ENST00000532736 1024 ntBASIC5.71□□□□□ -1.5
SSX2IPQ9Y2D8 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC5.71□□□□□ -1.5
SSX2IPQ9Y2D8 AP003717.3-201ENST00000544832 1180 ntBASIC5.71□□□□□ -1.5
SSX2IPQ9Y2D8 AC091515.1-201ENST00000548110 679 ntBASIC5.71□□□□□ -1.5
SSX2IPQ9Y2D8 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC5.71□□□□□ -1.5
SSX2IPQ9Y2D8 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
SSX2IPQ9Y2D8 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC5.71□□□□□ -1.5
SSX2IPQ9Y2D8 AC009597.2-201ENST00000604659 592 ntBASIC5.71□□□□□ -1.5
SSX2IPQ9Y2D8 AC005084.1-201ENST00000605160 304 ntBASIC5.71□□□□□ -1.5
SSX2IPQ9Y2D8 AL451064.1-201ENST00000607718 471 ntBASIC5.71□□□□□ -1.5
SSX2IPQ9Y2D8 AP002791.1-201ENST00000623291 381 ntBASIC5.71□□□□□ -1.5
SSX2IPQ9Y2D8 AP001784.1-201ENST00000624107 428 ntBASIC5.71□□□□□ -1.5
SSX2IPQ9Y2D8 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SSX2IPQ9Y2D8 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SSX2IPQ9Y2D8 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SSX2IPQ9Y2D8 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.71□□□□□ -1.5
SSX2IPQ9Y2D8 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
SSX2IPQ9Y2D8 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.71□□□□□ -1.5
SSX2IPQ9Y2D8 AL355578.1-201ENST00000607405 1328 ntBASIC5.71□□□□□ -1.5
SSX2IPQ9Y2D8 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
SSX2IPQ9Y2D8 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SSX2IPQ9Y2D8 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SSX2IPQ9Y2D8 MAPK10-328ENST00000641553 4009 ntBASIC5.7□□□□□ -1.5
SSX2IPQ9Y2D8 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SSX2IPQ9Y2D8 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.7□□□□□ -1.5
SSX2IPQ9Y2D8 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SSX2IPQ9Y2D8 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.7□□□□□ -1.5
SSX2IPQ9Y2D8 MIR105-1-201ENST00000385222 81 ntBASIC5.7□□□□□ -1.5
SSX2IPQ9Y2D8 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
SSX2IPQ9Y2D8 MTND4P13-201ENST00000402078 1023 ntBASIC5.7□□□□□ -1.5
SSX2IPQ9Y2D8 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
SSX2IPQ9Y2D8 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC5.7□□□□□ -1.5
SSX2IPQ9Y2D8 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SSX2IPQ9Y2D8 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC5.7□□□□□ -1.5
SSX2IPQ9Y2D8 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.7□□□□□ -1.5
SSX2IPQ9Y2D8 Z95152.1-201ENST00000453556 656 ntBASIC5.7□□□□□ -1.5
SSX2IPQ9Y2D8 AZGP1P2-201ENST00000454506 345 ntBASIC5.7□□□□□ -1.5
SSX2IPQ9Y2D8 AC008280.2-201ENST00000455473 307 ntBASIC5.7□□□□□ -1.5
SSX2IPQ9Y2D8 AC082651.2-201ENST00000496833 166 ntBASIC5.7□□□□□ -1.5
SSX2IPQ9Y2D8 RPS17P5-201ENST00000498293 408 ntBASIC5.7□□□□□ -1.5
SSX2IPQ9Y2D8 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SSX2IPQ9Y2D8 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC5.7□□□□□ -1.5
SSX2IPQ9Y2D8 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SSX2IPQ9Y2D8 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.7□□□□□ -1.5
SSX2IPQ9Y2D8 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.7□□□□□ -1.5
SSX2IPQ9Y2D8 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC5.7□□□□□ -1.5
SSX2IPQ9Y2D8 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC5.7□□□□□ -1.5
SSX2IPQ9Y2D8 OR8A2P-201ENST00000528631 952 ntBASIC5.7□□□□□ -1.5
SSX2IPQ9Y2D8 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
SSX2IPQ9Y2D8 AP004607.2-201ENST00000533949 322 ntBASIC5.7□□□□□ -1.5
SSX2IPQ9Y2D8 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.7□□□□□ -1.5
SSX2IPQ9Y2D8 OR11J2P-201ENST00000555298 907 ntBASIC5.7□□□□□ -1.5
SSX2IPQ9Y2D8 ZNF971P-201ENST00000562068 1249 ntBASIC5.7□□□□□ -1.5
SSX2IPQ9Y2D8 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC5.7□□□□□ -1.5
SSX2IPQ9Y2D8 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC5.7□□□□□ -1.5
SSX2IPQ9Y2D8 RN7SL356P-201ENST00000582228 248 ntBASIC5.7□□□□□ -1.5
SSX2IPQ9Y2D8 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.7□□□□□ -1.5
SSX2IPQ9Y2D8 AC021755.4-201ENST00000616620 456 ntBASIC5.7□□□□□ -1.5
SSX2IPQ9Y2D8 AC092159.4-201ENST00000624944 550 ntBASIC5.7□□□□□ -1.5
SSX2IPQ9Y2D8 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
SSX2IPQ9Y2D8 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SSX2IPQ9Y2D8 AC099786.3-201ENST00000565735 1410 ntBASIC5.7□□□□□ -1.5
SSX2IPQ9Y2D8 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SSX2IPQ9Y2D8 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
SSX2IPQ9Y2D8 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.7□□□□□ -1.5
SSX2IPQ9Y2D8 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
SSX2IPQ9Y2D8 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
SSX2IPQ9Y2D8 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
SSX2IPQ9Y2D8 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SSX2IPQ9Y2D8 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 128.9 ms