Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AC011998.1-201ENST00000433403 117 ntBASIC4.68□□□□□ -1.66
CISHQ9NSE2 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.68□□□□□ -1.66
CISHQ9NSE2 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.68□□□□□ -1.66
CISHQ9NSE2 CYCSP42-201ENST00000450823 238 ntBASIC4.68□□□□□ -1.66
CISHQ9NSE2 Z95152.1-201ENST00000453556 656 ntBASIC4.68□□□□□ -1.66
CISHQ9NSE2 RN7SL41P-201ENST00000476144 297 ntBASIC4.68□□□□□ -1.66
CISHQ9NSE2 NIP7P2-201ENST00000485801 544 ntBASIC4.68□□□□□ -1.66
CISHQ9NSE2 RN7SL812P-201ENST00000493791 279 ntBASIC4.68□□□□□ -1.66
CISHQ9NSE2 AC025674.1-201ENST00000507074 324 ntBASIC4.68□□□□□ -1.66
CISHQ9NSE2 OR5BC1P-201ENST00000529327 739 ntBASIC4.68□□□□□ -1.66
CISHQ9NSE2 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CISHQ9NSE2 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.68□□□□□ -1.66
CISHQ9NSE2 AC008759.1-201ENST00000589783 983 ntBASIC4.68□□□□□ -1.66
CISHQ9NSE2 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.68□□□□□ -1.66
CISHQ9NSE2 uc_338.13-201ENST00000618243 179 ntBASIC4.68□□□□□ -1.66
CISHQ9NSE2 AL035461.2-201ENST00000619201 524 ntBASIC4.68□□□□□ -1.66
CISHQ9NSE2 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CISHQ9NSE2 AC006484.1-201ENST00000435086 1884 ntBASIC4.68□□□□□ -1.66
CISHQ9NSE2 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.68□□□□□ -1.66
CISHQ9NSE2 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC4.68□□□□□ -1.66
CISHQ9NSE2 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.68□□□□□ -1.66
CISHQ9NSE2 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CISHQ9NSE2 AC090017.1-201ENST00000548612 1779 ntBASIC4.68□□□□□ -1.66
CISHQ9NSE2 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC4.67□□□□□ -1.66
CISHQ9NSE2 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CISHQ9NSE2 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CISHQ9NSE2 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
CISHQ9NSE2 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.67□□□□□ -1.66
CISHQ9NSE2 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CISHQ9NSE2 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.67□□□□□ -1.66
CISHQ9NSE2 IGKV7-3-201ENST00000357453 298 ntBASIC4.67□□□□□ -1.66
CISHQ9NSE2 RNU4-39P-201ENST00000362455 127 ntBASIC4.67□□□□□ -1.66
CISHQ9NSE2 RNU1-32P-201ENST00000363937 159 ntBASIC4.67□□□□□ -1.66
CISHQ9NSE2 SNORA56-201ENST00000383966 129 ntBASIC4.67□□□□□ -1.66
CISHQ9NSE2 U3.22-201ENST00000391120 215 ntBASIC4.67□□□□□ -1.66
CISHQ9NSE2 AC097374.1-203ENST00000400783 485 ntBASIC4.67□□□□□ -1.66
CISHQ9NSE2 AC009237.10-201ENST00000414112 510 ntBASIC4.67□□□□□ -1.66
CISHQ9NSE2 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC4.67□□□□□ -1.66
CISHQ9NSE2 AC009480.2-201ENST00000422916 432 ntBASIC4.67□□□□□ -1.66
CISHQ9NSE2 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.67□□□□□ -1.66
CISHQ9NSE2 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.67□□□□□ -1.66
CISHQ9NSE2 RPL7P33-201ENST00000444159 742 ntBASIC4.67□□□□□ -1.66
CISHQ9NSE2 PHBP16-201ENST00000446318 950 ntBASIC4.67□□□□□ -1.66
CISHQ9NSE2 RPL23AP24-201ENST00000458203 385 ntBASIC4.67□□□□□ -1.66
CISHQ9NSE2 RN7SL98P-201ENST00000462271 300 ntBASIC4.67□□□□□ -1.66
CISHQ9NSE2 RPL35AP15-201ENST00000468042 339 ntBASIC4.67□□□□□ -1.66
CISHQ9NSE2 RPL5P22-201ENST00000480199 884 ntBASIC4.67□□□□□ -1.66
CISHQ9NSE2 RN7SL810P-201ENST00000493031 276 ntBASIC4.67□□□□□ -1.66
CISHQ9NSE2 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC4.67□□□□□ -1.66
CISHQ9NSE2 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.67□□□□□ -1.66
CISHQ9NSE2 AC010476.1-201ENST00000519111 851 ntBASIC4.67□□□□□ -1.66
CISHQ9NSE2 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC4.67□□□□□ -1.66
CISHQ9NSE2 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CISHQ9NSE2 AC021483.2-201ENST00000567415 758 ntBASIC4.67□□□□□ -1.66
CISHQ9NSE2 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.67□□□□□ -1.66
CISHQ9NSE2 AC005034.4-201ENST00000603612 899 ntBASIC4.67□□□□□ -1.66
CISHQ9NSE2 AL121873.1-201ENST00000616013 524 ntBASIC4.67□□□□□ -1.66
CISHQ9NSE2 FP325313.1-201ENST00000638228 703 ntBASIC4.67□□□□□ -1.66
CISHQ9NSE2 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
CISHQ9NSE2 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
CISHQ9NSE2 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.67□□□□□ -1.66
CISHQ9NSE2 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CISHQ9NSE2 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.67□□□□□ -1.66
CISHQ9NSE2 AC010266.2-201ENST00000564741 3255 ntBASIC4.66□□□□□ -1.66
CISHQ9NSE2 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
CISHQ9NSE2 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.66□□□□□ -1.66
CISHQ9NSE2 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.66□□□□□ -1.66
CISHQ9NSE2 OR4G1P-202ENST00000641173 1788 ntBASIC4.66□□□□□ -1.66
CISHQ9NSE2 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CISHQ9NSE2 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.66□□□□□ -1.66
CISHQ9NSE2 RNA5SP372-201ENST00000390836 115 ntBASIC4.66□□□□□ -1.66
CISHQ9NSE2 SNORA11F-201ENST00000408237 128 ntBASIC4.66□□□□□ -1.66
CISHQ9NSE2 MIR1911-201ENST00000410783 80 ntBASIC4.66□□□□□ -1.66
CISHQ9NSE2 UBTFL3-201ENST00000418934 1024 ntBASIC4.66□□□□□ -1.66
CISHQ9NSE2 NFYAP1-201ENST00000431953 972 ntBASIC4.66□□□□□ -1.66
CISHQ9NSE2 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.66□□□□□ -1.66
CISHQ9NSE2 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.66□□□□□ -1.66
CISHQ9NSE2 SEPT7P3-201ENST00000455017 621 ntBASIC4.66□□□□□ -1.66
CISHQ9NSE2 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.66□□□□□ -1.66
CISHQ9NSE2 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CISHQ9NSE2 AC090589.1-201ENST00000473109 362 ntBASIC4.66□□□□□ -1.66
CISHQ9NSE2 UBTFL6-201ENST00000477929 1024 ntBASIC4.66□□□□□ -1.66
CISHQ9NSE2 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.66□□□□□ -1.66
CISHQ9NSE2 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.66□□□□□ -1.66
CISHQ9NSE2 AP002981.1-201ENST00000517692 975 ntBASIC4.66□□□□□ -1.66
CISHQ9NSE2 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.66□□□□□ -1.66
CISHQ9NSE2 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.66□□□□□ -1.66
CISHQ9NSE2 AC113403.1-201ENST00000604910 193 ntBASIC4.66□□□□□ -1.66
CISHQ9NSE2 AL356218.2-201ENST00000605264 187 ntBASIC4.66□□□□□ -1.66
CISHQ9NSE2 AC026979.4-201ENST00000606555 645 ntBASIC4.66□□□□□ -1.66
CISHQ9NSE2 RNU6-84P-201ENST00000607737 102 ntBASIC4.66□□□□□ -1.66
CISHQ9NSE2 AL021997.2-201ENST00000615674 271 ntBASIC4.66□□□□□ -1.66
CISHQ9NSE2 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.66□□□□□ -1.66
CISHQ9NSE2 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC4.66□□□□□ -1.66
CISHQ9NSE2 CDY11P-201ENST00000447168 1651 ntBASIC4.66□□□□□ -1.66
CISHQ9NSE2 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.66□□□□□ -1.66
CISHQ9NSE2 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CISHQ9NSE2 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
CISHQ9NSE2 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CISHQ9NSE2 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms