Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 TPMTP3-201ENST00000411928 735 ntBASIC6.19□□□□□ -1.42
TRIM55Q9BYV6 RPL7P8-201ENST00000411964 730 ntBASIC6.19□□□□□ -1.42
TRIM55Q9BYV6 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC6.19□□□□□ -1.42
TRIM55Q9BYV6 PRELID3BP11-201ENST00000414230 479 ntBASIC6.19□□□□□ -1.42
TRIM55Q9BYV6 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC6.19□□□□□ -1.42
TRIM55Q9BYV6 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM55Q9BYV6 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC6.19□□□□□ -1.42
TRIM55Q9BYV6 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC6.19□□□□□ -1.42
TRIM55Q9BYV6 Z99497.1-201ENST00000421282 135 ntBASIC6.19□□□□□ -1.42
TRIM55Q9BYV6 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM55Q9BYV6 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC6.19□□□□□ -1.42
TRIM55Q9BYV6 VN1R21P-201ENST00000426703 765 ntBASIC6.19□□□□□ -1.42
TRIM55Q9BYV6 MGAT2P2-201ENST00000427194 797 ntBASIC6.19□□□□□ -1.42
TRIM55Q9BYV6 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC6.19□□□□□ -1.42
TRIM55Q9BYV6 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC6.19□□□□□ -1.42
TRIM55Q9BYV6 AC010881.1-201ENST00000433830 235 ntBASIC6.19□□□□□ -1.42
TRIM55Q9BYV6 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC6.19□□□□□ -1.42
TRIM55Q9BYV6 MTND1P30-201ENST00000441241 901 ntBASIC6.19□□□□□ -1.42
TRIM55Q9BYV6 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM55Q9BYV6 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC6.19□□□□□ -1.42
TRIM55Q9BYV6 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC6.19□□□□□ -1.42
TRIM55Q9BYV6 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC6.19□□□□□ -1.42
TRIM55Q9BYV6 COX4I1P2-201ENST00000447446 547 ntBASIC6.19□□□□□ -1.42
TRIM55Q9BYV6 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC6.19□□□□□ -1.42
TRIM55Q9BYV6 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC6.19□□□□□ -1.42
TRIM55Q9BYV6 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC6.19□□□□□ -1.42
TRIM55Q9BYV6 NDUFA5P5-201ENST00000468361 342 ntBASIC6.19□□□□□ -1.42
TRIM55Q9BYV6 RPL7P41-201ENST00000485823 957 ntBASIC6.19□□□□□ -1.42
TRIM55Q9BYV6 AC109486.1-201ENST00000486833 374 ntBASIC6.19□□□□□ -1.42
TRIM55Q9BYV6 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC6.19□□□□□ -1.42
TRIM55Q9BYV6 AC027026.1-201ENST00000532323 742 ntBASIC6.19□□□□□ -1.42
TRIM55Q9BYV6 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
TRIM55Q9BYV6 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM55Q9BYV6 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC6.19□□□□□ -1.42
TRIM55Q9BYV6 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC6.19□□□□□ -1.42
TRIM55Q9BYV6 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC6.19□□□□□ -1.42
TRIM55Q9BYV6 MIR4502-201ENST00000580432 81 ntBASIC6.19□□□□□ -1.42
TRIM55Q9BYV6 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
TRIM55Q9BYV6 NPIPB1P-202ENST00000588786 828 ntBASIC6.19□□□□□ -1.42
TRIM55Q9BYV6 AC010200.2-201ENST00000605098 235 ntBASIC6.19□□□□□ -1.42
TRIM55Q9BYV6 AC103591.3-201ENST00000608684 209 ntBASIC6.19□□□□□ -1.42
TRIM55Q9BYV6 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM55Q9BYV6 AC092650.2-201ENST00000619984 902 ntBASIC6.19□□□□□ -1.42
TRIM55Q9BYV6 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
TRIM55Q9BYV6 AC135068.5-201ENST00000624197 983 ntBASIC6.19□□□□□ -1.42
TRIM55Q9BYV6 AP001052.1-201ENST00000626421 99 ntBASIC6.19□□□□□ -1.42
TRIM55Q9BYV6 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC6.19□□□□□ -1.42
TRIM55Q9BYV6 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC6.19□□□□□ -1.42
TRIM55Q9BYV6 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM55Q9BYV6 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
TRIM55Q9BYV6 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.19□□□□□ -1.42
TRIM55Q9BYV6 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC6.19□□□□□ -1.42
TRIM55Q9BYV6 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM55Q9BYV6 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM55Q9BYV6 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
TRIM55Q9BYV6 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
TRIM55Q9BYV6 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM55Q9BYV6 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM55Q9BYV6 TCP11X1-202ENST00000622971 1372 ntBASIC6.18□□□□□ -1.42
TRIM55Q9BYV6 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
TRIM55Q9BYV6 AC004158.1-201ENST00000564508 4319 ntBASIC6.18□□□□□ -1.42
TRIM55Q9BYV6 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TRIM55Q9BYV6 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.18□□□□□ -1.42
TRIM55Q9BYV6 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.18□□□□□ -1.42
TRIM55Q9BYV6 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
TRIM55Q9BYV6 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TRIM55Q9BYV6 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
TRIM55Q9BYV6 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
TRIM55Q9BYV6 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC6.18□□□□□ -1.42
TRIM55Q9BYV6 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
TRIM55Q9BYV6 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
TRIM55Q9BYV6 AC092642.1-201ENST00000392417 425 ntBASIC6.18□□□□□ -1.42
TRIM55Q9BYV6 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
TRIM55Q9BYV6 AC003045.1-201ENST00000398779 713 ntBASIC6.18□□□□□ -1.42
TRIM55Q9BYV6 PRRC2CP1-201ENST00000404428 159 ntBASIC6.18□□□□□ -1.42
TRIM55Q9BYV6 RNA5SP198-201ENST00000410376 127 ntBASIC6.18□□□□□ -1.42
TRIM55Q9BYV6 AL390774.1-201ENST00000411924 246 ntBASIC6.18□□□□□ -1.42
TRIM55Q9BYV6 USP9YP33-201ENST00000412220 421 ntBASIC6.18□□□□□ -1.42
TRIM55Q9BYV6 RPL23AP39-201ENST00000415533 405 ntBASIC6.18□□□□□ -1.42
TRIM55Q9BYV6 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC6.18□□□□□ -1.42
TRIM55Q9BYV6 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC6.18□□□□□ -1.42
TRIM55Q9BYV6 HSPD1P12-201ENST00000429127 1069 ntBASIC6.18□□□□□ -1.42
TRIM55Q9BYV6 IGLV3-4-201ENST00000432300 244 ntBASIC6.18□□□□□ -1.42
TRIM55Q9BYV6 RPL37P1-201ENST00000432310 284 ntBASIC6.18□□□□□ -1.42
TRIM55Q9BYV6 AC007679.3-201ENST00000434035 414 ntBASIC6.18□□□□□ -1.42
TRIM55Q9BYV6 AL731534.1-201ENST00000434711 269 ntBASIC6.18□□□□□ -1.42
TRIM55Q9BYV6 USP9YP35-201ENST00000435696 412 ntBASIC6.18□□□□□ -1.42
TRIM55Q9BYV6 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC6.18□□□□□ -1.42
TRIM55Q9BYV6 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.18□□□□□ -1.42
TRIM55Q9BYV6 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC6.18□□□□□ -1.42
TRIM55Q9BYV6 AL020997.1-201ENST00000446554 349 ntBASIC6.18□□□□□ -1.42
TRIM55Q9BYV6 AC108463.1-201ENST00000450258 347 ntBASIC6.18□□□□□ -1.42
TRIM55Q9BYV6 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC6.18□□□□□ -1.42
TRIM55Q9BYV6 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC6.18□□□□□ -1.42
TRIM55Q9BYV6 OR52E3P-201ENST00000452083 936 ntBASIC6.18□□□□□ -1.42
TRIM55Q9BYV6 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC6.18□□□□□ -1.42
TRIM55Q9BYV6 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC6.18□□□□□ -1.42
TRIM55Q9BYV6 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC6.18□□□□□ -1.42
TRIM55Q9BYV6 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TRIM55Q9BYV6 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms