Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
TOPBP1Q92547 AC110768.1-201ENST00000509222 400 ntBASIC7.26□□□□□ -1.25
TOPBP1Q92547 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC7.26□□□□□ -1.25
TOPBP1Q92547 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC7.26□□□□□ -1.25
TOPBP1Q92547 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC7.26□□□□□ -1.25
TOPBP1Q92547 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC7.26□□□□□ -1.25
TOPBP1Q92547 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
TOPBP1Q92547 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
TOPBP1Q92547 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
TOPBP1Q92547 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
TOPBP1Q92547 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
TOPBP1Q92547 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
TOPBP1Q92547 MIR483-201ENST00000385070 76 ntBASIC7.25□□□□□ -1.25
TOPBP1Q92547 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC7.25□□□□□ -1.25
TOPBP1Q92547 RAB9AP3-201ENST00000412737 573 ntBASIC7.25□□□□□ -1.25
TOPBP1Q92547 RAB9AP1-201ENST00000449393 573 ntBASIC7.25□□□□□ -1.25
TOPBP1Q92547 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
TOPBP1Q92547 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
TOPBP1Q92547 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
TOPBP1Q92547 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC7.25□□□□□ -1.25
TOPBP1Q92547 GTF2IP22-201ENST00000554443 182 ntBASIC7.25□□□□□ -1.25
TOPBP1Q92547 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC7.25□□□□□ -1.25
TOPBP1Q92547 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC7.25□□□□□ -1.25
TOPBP1Q92547 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC7.25□□□□□ -1.25
TOPBP1Q92547 MIR3200-201ENST00000580767 85 ntBASIC7.25□□□□□ -1.25
TOPBP1Q92547 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC7.25□□□□□ -1.25
TOPBP1Q92547 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
TOPBP1Q92547 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC7.25□□□□□ -1.25
TOPBP1Q92547 AC021422.1-201ENST00000621212 473 ntBASIC7.25□□□□□ -1.25
TOPBP1Q92547 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
TOPBP1Q92547 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
TOPBP1Q92547 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC7.24□□□□□ -1.25
TOPBP1Q92547 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
TOPBP1Q92547 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC7.24□□□□□ -1.25
TOPBP1Q92547 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
TOPBP1Q92547 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
TOPBP1Q92547 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
TOPBP1Q92547 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC7.24□□□□□ -1.25
TOPBP1Q92547 OR11H4-201ENST00000315409 1082 ntBASIC7.24□□□□□ -1.25
TOPBP1Q92547 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
TOPBP1Q92547 EIF4EBP2P3-201ENST00000403144 334 ntBASIC7.24□□□□□ -1.25
TOPBP1Q92547 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC7.24□□□□□ -1.25
TOPBP1Q92547 AC090686.1-201ENST00000481577 749 ntBASIC7.24□□□□□ -1.25
TOPBP1Q92547 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC7.24□□□□□ -1.25
TOPBP1Q92547 ATP1B1P1-201ENST00000509767 915 ntBASIC7.24□□□□□ -1.25
TOPBP1Q92547 RNA5SP497-201ENST00000516081 97 ntBASIC7.24□□□□□ -1.25
TOPBP1Q92547 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC7.24□□□□□ -1.25
TOPBP1Q92547 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC7.24□□□□□ -1.25
TOPBP1Q92547 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC7.24□□□□□ -1.25
TOPBP1Q92547 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC7.24□□□□□ -1.25
TOPBP1Q92547 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC7.24□□□□□ -1.25
TOPBP1Q92547 AL357559.1-201ENST00000622228 274 ntBASIC7.24□□□□□ -1.25
TOPBP1Q92547 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
TOPBP1Q92547 AC009093.8-201ENST00000641769 292 ntBASIC7.24□□□□□ -1.25
TOPBP1Q92547 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
TOPBP1Q92547 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
TOPBP1Q92547 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
TOPBP1Q92547 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
TOPBP1Q92547 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
TOPBP1Q92547 CASC19-261ENST00000641853 1638 ntBASIC7.24□□□□□ -1.25
TOPBP1Q92547 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
TOPBP1Q92547 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
TOPBP1Q92547 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC7.23□□□□□ -1.25
TOPBP1Q92547 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
TOPBP1Q92547 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC7.23□□□□□ -1.25
TOPBP1Q92547 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
TOPBP1Q92547 EI24P3-201ENST00000399046 1062 ntBASIC7.23□□□□□ -1.25
TOPBP1Q92547 RPS20P14-201ENST00000412545 360 ntBASIC7.23□□□□□ -1.25
TOPBP1Q92547 AC079809.1-201ENST00000415468 276 ntBASIC7.23□□□□□ -1.25
TOPBP1Q92547 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC7.23□□□□□ -1.25
TOPBP1Q92547 AC104333.2-201ENST00000422630 192 ntBASIC7.23□□□□□ -1.25
TOPBP1Q92547 AL691449.1-201ENST00000426570 421 ntBASIC7.23□□□□□ -1.25
TOPBP1Q92547 AC091286.1-201ENST00000431233 461 ntBASIC7.23□□□□□ -1.25
TOPBP1Q92547 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC7.23□□□□□ -1.25
TOPBP1Q92547 AP000619.3-201ENST00000535634 1127 ntBASIC7.23□□□□□ -1.25
TOPBP1Q92547 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC7.23□□□□□ -1.25
TOPBP1Q92547 AC084757.4-201ENST00000616350 526 ntBASIC7.23□□□□□ -1.25
TOPBP1Q92547 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC7.23□□□□□ -1.25
TOPBP1Q92547 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
TOPBP1Q92547 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
TOPBP1Q92547 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC7.23□□□□□ -1.25
TOPBP1Q92547 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
TOPBP1Q92547 RPL21P91-201ENST00000429231 479 ntBASIC7.22□□□□□ -1.25
TOPBP1Q92547 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC7.22□□□□□ -1.25
TOPBP1Q92547 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC7.22□□□□□ -1.25
TOPBP1Q92547 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC7.22□□□□□ -1.25
TOPBP1Q92547 AC010487.1-201ENST00000594408 1172 ntBASIC7.22□□□□□ -1.25
TOPBP1Q92547 BNIP3P19-201ENST00000605397 577 ntBASIC7.22□□□□□ -1.25
TOPBP1Q92547 AC096577.2-201ENST00000611455 153 ntBASIC7.22□□□□□ -1.25
TOPBP1Q92547 AL021997.2-201ENST00000615674 271 ntBASIC7.22□□□□□ -1.25
TOPBP1Q92547 AC015914.2-201ENST00000618167 288 ntBASIC7.22□□□□□ -1.25
TOPBP1Q92547 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC7.22□□□□□ -1.25
TOPBP1Q92547 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC7.22□□□□□ -1.25
TOPBP1Q92547 AP001029.2-203ENST00000589795 4910 ntBASIC7.22□□□□□ -1.25
TOPBP1Q92547 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
TOPBP1Q92547 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
TOPBP1Q92547 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
TOPBP1Q92547 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC7.22□□□□□ -1.25
TOPBP1Q92547 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
TOPBP1Q92547 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms