Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.79□□□□□ -1.64
BEST3Q8N1M1 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.79□□□□□ -1.64
BEST3Q8N1M1 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.79□□□□□ -1.64
BEST3Q8N1M1 AC022133.1-201ENST00000490961 571 ntBASIC4.79□□□□□ -1.64
BEST3Q8N1M1 RPS23P1-201ENST00000491662 432 ntBASIC4.79□□□□□ -1.64
BEST3Q8N1M1 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
BEST3Q8N1M1 AC021193.1-201ENST00000511607 420 ntBASIC4.79□□□□□ -1.64
BEST3Q8N1M1 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
BEST3Q8N1M1 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.79□□□□□ -1.64
BEST3Q8N1M1 OR8A2P-201ENST00000528631 952 ntBASIC4.79□□□□□ -1.64
BEST3Q8N1M1 CYB5AP5-201ENST00000549779 389 ntBASIC4.79□□□□□ -1.64
BEST3Q8N1M1 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
BEST3Q8N1M1 LSM3P2-201ENST00000551246 273 ntBASIC4.79□□□□□ -1.64
BEST3Q8N1M1 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
BEST3Q8N1M1 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.79□□□□□ -1.64
BEST3Q8N1M1 AC127024.5-201ENST00000580085 462 ntBASIC4.79□□□□□ -1.64
BEST3Q8N1M1 AC011840.5-201ENST00000582125 771 ntBASIC4.79□□□□□ -1.64
BEST3Q8N1M1 AC008814.1-201ENST00000603797 406 ntBASIC4.79□□□□□ -1.64
BEST3Q8N1M1 AC116651.1-201ENST00000609724 556 ntBASIC4.79□□□□□ -1.64
BEST3Q8N1M1 AC093799.2-201ENST00000610062 578 ntBASIC4.79□□□□□ -1.64
BEST3Q8N1M1 Z95327.3-201ENST00000610385 572 ntBASIC4.79□□□□□ -1.64
BEST3Q8N1M1 DUXAP10-204ENST00000612052 616 ntBASIC4.79□□□□□ -1.64
BEST3Q8N1M1 AC011815.3-201ENST00000624194 473 ntBASIC4.79□□□□□ -1.64
BEST3Q8N1M1 AP001002.2-201ENST00000625137 386 ntBASIC4.79□□□□□ -1.64
BEST3Q8N1M1 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.79□□□□□ -1.64
BEST3Q8N1M1 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
BEST3Q8N1M1 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
BEST3Q8N1M1 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.79□□□□□ -1.64
BEST3Q8N1M1 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.79□□□□□ -1.64
BEST3Q8N1M1 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
BEST3Q8N1M1 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.79□□□□□ -1.64
BEST3Q8N1M1 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
BEST3Q8N1M1 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
BEST3Q8N1M1 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
BEST3Q8N1M1 AC023421.1-201ENST00000590535 1785 ntBASIC4.78□□□□□ -1.64
BEST3Q8N1M1 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.78□□□□□ -1.64
BEST3Q8N1M1 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
BEST3Q8N1M1 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
BEST3Q8N1M1 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
BEST3Q8N1M1 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
BEST3Q8N1M1 ADAM5-202ENST00000399789 1942 ntBASIC4.78□□□□□ -1.64
BEST3Q8N1M1 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
BEST3Q8N1M1 NXF4-202ENST00000416098 1465 ntBASIC4.78□□□□□ -1.64
BEST3Q8N1M1 RNA5SP455-201ENST00000365190 119 ntBASIC4.78□□□□□ -1.64
BEST3Q8N1M1 RNU6-185P-201ENST00000384421 107 ntBASIC4.78□□□□□ -1.64
BEST3Q8N1M1 MIR585-201ENST00000384887 94 ntBASIC4.78□□□□□ -1.64
BEST3Q8N1M1 MTCO1P52-201ENST00000433928 531 ntBASIC4.78□□□□□ -1.64
BEST3Q8N1M1 Z80107.1-201ENST00000436830 412 ntBASIC4.78□□□□□ -1.64
BEST3Q8N1M1 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.78□□□□□ -1.64
BEST3Q8N1M1 AL772161.1-201ENST00000439130 476 ntBASIC4.78□□□□□ -1.64
BEST3Q8N1M1 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.78□□□□□ -1.64
BEST3Q8N1M1 OR52E3P-201ENST00000452083 936 ntBASIC4.78□□□□□ -1.64
BEST3Q8N1M1 DNAJB5P1-201ENST00000454004 806 ntBASIC4.78□□□□□ -1.64
BEST3Q8N1M1 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC4.78□□□□□ -1.64
BEST3Q8N1M1 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC4.78□□□□□ -1.64
BEST3Q8N1M1 RPL7P41-201ENST00000485823 957 ntBASIC4.78□□□□□ -1.64
BEST3Q8N1M1 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
BEST3Q8N1M1 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC4.78□□□□□ -1.64
BEST3Q8N1M1 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
BEST3Q8N1M1 AC006427.1-201ENST00000514359 712 ntBASIC4.78□□□□□ -1.64
BEST3Q8N1M1 RN7SKP260-201ENST00000516907 149 ntBASIC4.78□□□□□ -1.64
BEST3Q8N1M1 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.78□□□□□ -1.64
BEST3Q8N1M1 AP001372.4-201ENST00000524889 472 ntBASIC4.78□□□□□ -1.64
BEST3Q8N1M1 AP001922.4-201ENST00000526967 290 ntBASIC4.78□□□□□ -1.64
BEST3Q8N1M1 OR5D15P-201ENST00000531671 942 ntBASIC4.78□□□□□ -1.64
BEST3Q8N1M1 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
BEST3Q8N1M1 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.78□□□□□ -1.64
BEST3Q8N1M1 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC4.78□□□□□ -1.64
BEST3Q8N1M1 AC093591.2-201ENST00000565254 3843 ntBASIC4.78□□□□□ -1.64
BEST3Q8N1M1 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
BEST3Q8N1M1 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC4.78□□□□□ -1.64
BEST3Q8N1M1 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.78□□□□□ -1.64
BEST3Q8N1M1 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.78□□□□□ -1.64
BEST3Q8N1M1 OR2BH1P-201ENST00000608850 864 ntBASIC4.78□□□□□ -1.64
BEST3Q8N1M1 AL049539.1-201ENST00000611964 459 ntBASIC4.78□□□□□ -1.64
BEST3Q8N1M1 EIF3FP1-201ENST00000613970 806 ntBASIC4.78□□□□□ -1.64
BEST3Q8N1M1 AL353662.3-201ENST00000625131 237 ntBASIC4.78□□□□□ -1.64
BEST3Q8N1M1 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
BEST3Q8N1M1 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
BEST3Q8N1M1 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
BEST3Q8N1M1 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.78□□□□□ -1.64
BEST3Q8N1M1 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
BEST3Q8N1M1 AC017007.4-201ENST00000503353 1352 ntBASIC4.78□□□□□ -1.64
BEST3Q8N1M1 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
BEST3Q8N1M1 MAPK6PS2-201ENST00000379571 2060 ntBASIC4.77□□□□□ -1.65
BEST3Q8N1M1 MTCO1P7-201ENST00000419523 1542 ntBASIC4.77□□□□□ -1.65
BEST3Q8N1M1 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
BEST3Q8N1M1 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
BEST3Q8N1M1 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
BEST3Q8N1M1 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
BEST3Q8N1M1 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.77□□□□□ -1.65
BEST3Q8N1M1 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
BEST3Q8N1M1 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
BEST3Q8N1M1 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.77□□□□□ -1.65
BEST3Q8N1M1 AC103591.2-201ENST00000265259 766 ntBASIC4.77□□□□□ -1.65
BEST3Q8N1M1 METTL21EP-201ENST00000298105 713 ntBASIC4.77□□□□□ -1.65
BEST3Q8N1M1 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
BEST3Q8N1M1 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
BEST3Q8N1M1 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.77□□□□□ -1.65
BEST3Q8N1M1 RNA5SP123-201ENST00000363244 119 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 267 ms