Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 RNU6-610P-201ENST00000384264 107 ntBASIC5.58□□□□□ -1.52
HERC6Q8IVU3 RNU6-1257P-201ENST00000384625 110 ntBASIC5.58□□□□□ -1.52
HERC6Q8IVU3 U3.28-201ENST00000391249 210 ntBASIC5.58□□□□□ -1.52
HERC6Q8IVU3 HMGB3P19-201ENST00000403971 560 ntBASIC5.58□□□□□ -1.52
HERC6Q8IVU3 AL355615.1-201ENST00000406187 641 ntBASIC5.58□□□□□ -1.52
HERC6Q8IVU3 AC010385.1-201ENST00000412374 256 ntBASIC5.58□□□□□ -1.52
HERC6Q8IVU3 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.58□□□□□ -1.52
HERC6Q8IVU3 AC079809.1-201ENST00000415468 276 ntBASIC5.58□□□□□ -1.52
HERC6Q8IVU3 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.58□□□□□ -1.52
HERC6Q8IVU3 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.58□□□□□ -1.52
HERC6Q8IVU3 AC011242.1-201ENST00000433596 1158 ntBASIC5.58□□□□□ -1.52
HERC6Q8IVU3 MTCO1P52-201ENST00000433928 531 ntBASIC5.58□□□□□ -1.52
HERC6Q8IVU3 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.58□□□□□ -1.52
HERC6Q8IVU3 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.58□□□□□ -1.52
HERC6Q8IVU3 RPL7P33-201ENST00000444159 742 ntBASIC5.58□□□□□ -1.52
HERC6Q8IVU3 AL096829.2-201ENST00000446582 742 ntBASIC5.58□□□□□ -1.52
HERC6Q8IVU3 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HERC6Q8IVU3 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC5.58□□□□□ -1.52
HERC6Q8IVU3 AC006967.1-201ENST00000467608 589 ntBASIC5.58□□□□□ -1.52
HERC6Q8IVU3 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.58□□□□□ -1.52
HERC6Q8IVU3 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
HERC6Q8IVU3 AC093720.1-201ENST00000505681 714 ntBASIC5.58□□□□□ -1.52
HERC6Q8IVU3 AC021106.1-201ENST00000509020 1058 ntBASIC5.58□□□□□ -1.52
HERC6Q8IVU3 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.58□□□□□ -1.52
HERC6Q8IVU3 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC5.58□□□□□ -1.52
HERC6Q8IVU3 AP000859.1-201ENST00000525536 307 ntBASIC5.58□□□□□ -1.52
HERC6Q8IVU3 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.58□□□□□ -1.52
HERC6Q8IVU3 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC5.58□□□□□ -1.52
HERC6Q8IVU3 TOMM20P2-201ENST00000540082 421 ntBASIC5.58□□□□□ -1.52
HERC6Q8IVU3 AP003717.3-201ENST00000544832 1180 ntBASIC5.58□□□□□ -1.52
HERC6Q8IVU3 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC5.58□□□□□ -1.52
HERC6Q8IVU3 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.58□□□□□ -1.52
HERC6Q8IVU3 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.58□□□□□ -1.52
HERC6Q8IVU3 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.58□□□□□ -1.52
HERC6Q8IVU3 AP003117.1-201ENST00000602771 554 ntBASIC5.58□□□□□ -1.52
HERC6Q8IVU3 RPL26P30-202ENST00000602923 645 ntBASIC5.58□□□□□ -1.52
HERC6Q8IVU3 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.58□□□□□ -1.52
HERC6Q8IVU3 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC5.58□□□□□ -1.52
HERC6Q8IVU3 AF129408.1-201ENST00000608767 431 ntBASIC5.58□□□□□ -1.52
HERC6Q8IVU3 AL139124.1-201ENST00000609123 421 ntBASIC5.58□□□□□ -1.52
HERC6Q8IVU3 AP000240.1-201ENST00000609910 452 ntBASIC5.58□□□□□ -1.52
HERC6Q8IVU3 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HERC6Q8IVU3 MIR6133-201ENST00000617057 108 ntBASIC5.58□□□□□ -1.52
HERC6Q8IVU3 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.58□□□□□ -1.52
HERC6Q8IVU3 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.58□□□□□ -1.52
HERC6Q8IVU3 AP003400.3-201ENST00000624904 346 ntBASIC5.58□□□□□ -1.52
HERC6Q8IVU3 AC099654.6-201ENST00000636487 512 ntBASIC5.58□□□□□ -1.52
HERC6Q8IVU3 AC083843.2-201ENST00000568248 6253 ntBASIC5.58□□□□□ -1.52
HERC6Q8IVU3 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.58□□□□□ -1.52
HERC6Q8IVU3 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
HERC6Q8IVU3 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HERC6Q8IVU3 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HERC6Q8IVU3 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HERC6Q8IVU3 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
HERC6Q8IVU3 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HERC6Q8IVU3 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.57□□□□□ -1.52
HERC6Q8IVU3 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
HERC6Q8IVU3 MTCO1P18-201ENST00000455518 1419 ntBASIC5.57□□□□□ -1.52
HERC6Q8IVU3 TCP11X1-202ENST00000622971 1372 ntBASIC5.57□□□□□ -1.52
HERC6Q8IVU3 MFSD8-213ENST00000641134 1327 ntBASIC5.57□□□□□ -1.52
HERC6Q8IVU3 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
HERC6Q8IVU3 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HERC6Q8IVU3 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.57□□□□□ -1.52
HERC6Q8IVU3 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
HERC6Q8IVU3 SNORD56.4-201ENST00000363883 71 ntBASIC5.57□□□□□ -1.52
HERC6Q8IVU3 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC5.57□□□□□ -1.52
HERC6Q8IVU3 RNA5SP187-201ENST00000384400 119 ntBASIC5.57□□□□□ -1.52
HERC6Q8IVU3 SNORA66-201ENST00000384792 133 ntBASIC5.57□□□□□ -1.52
HERC6Q8IVU3 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
HERC6Q8IVU3 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.57□□□□□ -1.52
HERC6Q8IVU3 RNA5SP113-201ENST00000410486 84 ntBASIC5.57□□□□□ -1.52
HERC6Q8IVU3 LINC01347-201ENST00000417964 355 ntBASIC5.57□□□□□ -1.52
HERC6Q8IVU3 RPL18P10-201ENST00000425606 538 ntBASIC5.57□□□□□ -1.52
HERC6Q8IVU3 ETF1P3-201ENST00000430422 1160 ntBASIC5.57□□□□□ -1.52
HERC6Q8IVU3 MTND2P2-201ENST00000434633 945 ntBASIC5.57□□□□□ -1.52
HERC6Q8IVU3 AL353093.1-201ENST00000441292 436 ntBASIC5.57□□□□□ -1.52
HERC6Q8IVU3 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.57□□□□□ -1.52
HERC6Q8IVU3 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC5.57□□□□□ -1.52
HERC6Q8IVU3 RPL7P48-201ENST00000461513 746 ntBASIC5.57□□□□□ -1.52
HERC6Q8IVU3 AC103987.1-201ENST00000473394 348 ntBASIC5.57□□□□□ -1.52
HERC6Q8IVU3 AC026979.1-201ENST00000492525 396 ntBASIC5.57□□□□□ -1.52
HERC6Q8IVU3 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.57□□□□□ -1.52
HERC6Q8IVU3 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC5.57□□□□□ -1.52
HERC6Q8IVU3 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.57□□□□□ -1.52
HERC6Q8IVU3 RNA5SP43-201ENST00000516559 110 ntBASIC5.57□□□□□ -1.52
HERC6Q8IVU3 AC010476.1-201ENST00000519111 851 ntBASIC5.57□□□□□ -1.52
HERC6Q8IVU3 MAL2-205ENST00000521048 575 ntTSL 4 BASIC5.57□□□□□ -1.52
HERC6Q8IVU3 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.57□□□□□ -1.52
HERC6Q8IVU3 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.57□□□□□ -1.52
HERC6Q8IVU3 AP000916.1-201ENST00000533869 835 ntBASIC5.57□□□□□ -1.52
HERC6Q8IVU3 AL049830.4-201ENST00000555149 351 ntBASIC5.57□□□□□ -1.52
HERC6Q8IVU3 PARP1P2-201ENST00000556806 195 ntBASIC5.57□□□□□ -1.52
HERC6Q8IVU3 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.57□□□□□ -1.52
HERC6Q8IVU3 AC136624.4-201ENST00000573044 370 ntBASIC5.57□□□□□ -1.52
HERC6Q8IVU3 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
HERC6Q8IVU3 AL391001.1-201ENST00000602747 715 ntBASIC5.57□□□□□ -1.52
HERC6Q8IVU3 AC009237.13-201ENST00000603193 276 ntBASIC5.57□□□□□ -1.52
HERC6Q8IVU3 AC105254.2-201ENST00000603636 436 ntBASIC5.57□□□□□ -1.52
HERC6Q8IVU3 AL391358.1-201ENST00000605342 190 ntBASIC5.57□□□□□ -1.52
HERC6Q8IVU3 AC019193.2-201ENST00000610012 634 ntBASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms