Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 FRG1HP-204ENST00000617940 757 ntBASIC5.68□□□□□ -1.5
SLC44A4Q53GD3 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SLC44A4Q53GD3 AC074101.1-201ENST00000637861 241 ntBASIC5.68□□□□□ -1.5
SLC44A4Q53GD3 LINC01739-205ENST00000641890 573 ntBASIC5.68□□□□□ -1.5
SLC44A4Q53GD3 AP005432.1-201ENST00000580891 3485 ntBASIC5.68□□□□□ -1.5
SLC44A4Q53GD3 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.68□□□□□ -1.5
SLC44A4Q53GD3 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SLC44A4Q53GD3 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
SLC44A4Q53GD3 SUCLA2P2-201ENST00000417269 1309 ntBASIC5.68□□□□□ -1.5
SLC44A4Q53GD3 MFSD8-239ENST00000641590 2479 ntBASIC5.68□□□□□ -1.5
SLC44A4Q53GD3 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SLC44A4Q53GD3 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SLC44A4Q53GD3 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC5.68□□□□□ -1.5
SLC44A4Q53GD3 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SLC44A4Q53GD3 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
SLC44A4Q53GD3 AC099786.3-201ENST00000565735 1410 ntBASIC5.67□□□□□ -1.5
SLC44A4Q53GD3 AC104260.2-201ENST00000623551 3497 ntBASIC5.67□□□□□ -1.5
SLC44A4Q53GD3 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SLC44A4Q53GD3 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SLC44A4Q53GD3 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.67□□□□□ -1.5
SLC44A4Q53GD3 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SLC44A4Q53GD3 MIR133B-201ENST00000362210 119 ntBASIC5.67□□□□□ -1.5
SLC44A4Q53GD3 SNORD1C-201ENST00000363315 78 ntBASIC5.67□□□□□ -1.5
SLC44A4Q53GD3 U3.10-201ENST00000364459 214 ntBASIC5.67□□□□□ -1.5
SLC44A4Q53GD3 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SLC44A4Q53GD3 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC5.67□□□□□ -1.5
SLC44A4Q53GD3 MIR513B-201ENST00000385136 84 ntBASIC5.67□□□□□ -1.5
SLC44A4Q53GD3 Y_RNA.578-201ENST00000390903 88 ntBASIC5.67□□□□□ -1.5
SLC44A4Q53GD3 RNU6-1242P-201ENST00000391052 103 ntBASIC5.67□□□□□ -1.5
SLC44A4Q53GD3 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
SLC44A4Q53GD3 AL009179.1-201ENST00000406085 265 ntBASIC5.67□□□□□ -1.5
SLC44A4Q53GD3 U3.36-201ENST00000408418 213 ntBASIC5.67□□□□□ -1.5
SLC44A4Q53GD3 BTF3P8-201ENST00000414577 526 ntBASIC5.67□□□□□ -1.5
SLC44A4Q53GD3 MTND4P3-201ENST00000417829 541 ntBASIC5.67□□□□□ -1.5
SLC44A4Q53GD3 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.67□□□□□ -1.5
SLC44A4Q53GD3 RPL12P28-201ENST00000430852 489 ntBASIC5.67□□□□□ -1.5
SLC44A4Q53GD3 AC073410.1-201ENST00000435125 589 ntBASIC5.67□□□□□ -1.5
SLC44A4Q53GD3 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC5.67□□□□□ -1.5
SLC44A4Q53GD3 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.67□□□□□ -1.5
SLC44A4Q53GD3 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC5.67□□□□□ -1.5
SLC44A4Q53GD3 ZNF886P-201ENST00000450781 723 ntBASIC5.67□□□□□ -1.5
SLC44A4Q53GD3 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC5.67□□□□□ -1.5
SLC44A4Q53GD3 AL035407.2-201ENST00000454090 378 ntBASIC5.67□□□□□ -1.5
SLC44A4Q53GD3 RPL12P39-201ENST00000455456 496 ntBASIC5.67□□□□□ -1.5
SLC44A4Q53GD3 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.67□□□□□ -1.5
SLC44A4Q53GD3 BX284632.1-201ENST00000478218 541 ntBASIC5.67□□□□□ -1.5
SLC44A4Q53GD3 RPL21P131-201ENST00000497298 483 ntBASIC5.67□□□□□ -1.5
SLC44A4Q53GD3 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.67□□□□□ -1.5
SLC44A4Q53GD3 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.67□□□□□ -1.5
SLC44A4Q53GD3 AC008837.1-201ENST00000511513 412 ntBASIC5.67□□□□□ -1.5
SLC44A4Q53GD3 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC5.67□□□□□ -1.5
SLC44A4Q53GD3 AC104417.1-201ENST00000523974 751 ntBASIC5.67□□□□□ -1.5
SLC44A4Q53GD3 HMGB1P40-201ENST00000525121 540 ntBASIC5.67□□□□□ -1.5
SLC44A4Q53GD3 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC5.67□□□□□ -1.5
SLC44A4Q53GD3 LRRC6P1-201ENST00000532188 885 ntBASIC5.67□□□□□ -1.5
SLC44A4Q53GD3 AC025260.1-201ENST00000548858 430 ntBASIC5.67□□□□□ -1.5
SLC44A4Q53GD3 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC5.67□□□□□ -1.5
SLC44A4Q53GD3 AC011840.5-201ENST00000582125 771 ntBASIC5.67□□□□□ -1.5
SLC44A4Q53GD3 MIR4480-201ENST00000582492 71 ntBASIC5.67□□□□□ -1.5
SLC44A4Q53GD3 AP005262.1-201ENST00000582646 997 ntBASIC5.67□□□□□ -1.5
SLC44A4Q53GD3 SS18L2P2-201ENST00000583960 235 ntBASIC5.67□□□□□ -1.5
SLC44A4Q53GD3 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
SLC44A4Q53GD3 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC5.67□□□□□ -1.5
SLC44A4Q53GD3 AC113368.1-201ENST00000603736 382 ntBASIC5.67□□□□□ -1.5
SLC44A4Q53GD3 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC5.67□□□□□ -1.5
SLC44A4Q53GD3 AC013468.1-201ENST00000608680 598 ntBASIC5.67□□□□□ -1.5
SLC44A4Q53GD3 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.67□□□□□ -1.5
SLC44A4Q53GD3 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
SLC44A4Q53GD3 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
SLC44A4Q53GD3 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
SLC44A4Q53GD3 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.67□□□□□ -1.5
SLC44A4Q53GD3 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.66□□□□□ -1.5
SLC44A4Q53GD3 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.66□□□□□ -1.5
SLC44A4Q53GD3 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
SLC44A4Q53GD3 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
SLC44A4Q53GD3 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
SLC44A4Q53GD3 UBE2Q2P1-202ENST00000354771 883 ntBASIC5.66□□□□□ -1.5
SLC44A4Q53GD3 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
SLC44A4Q53GD3 RNU4-31P-201ENST00000384211 141 ntBASIC5.66□□□□□ -1.5
SLC44A4Q53GD3 SNORD116-12-201ENST00000384468 92 ntBASIC5.66□□□□□ -1.5
SLC44A4Q53GD3 AC104297.1-201ENST00000393779 870 ntBASIC5.66□□□□□ -1.5
SLC44A4Q53GD3 AL133388.1-201ENST00000404509 287 ntBASIC5.66□□□□□ -1.5
SLC44A4Q53GD3 RN7SKP222-201ENST00000410651 315 ntBASIC5.66□□□□□ -1.5
SLC44A4Q53GD3 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC5.66□□□□□ -1.5
SLC44A4Q53GD3 AC105402.1-201ENST00000413336 545 ntBASIC5.66□□□□□ -1.5
SLC44A4Q53GD3 LINC01881-201ENST00000416103 412 ntBASIC5.66□□□□□ -1.5
SLC44A4Q53GD3 AC093655.2-201ENST00000425735 631 ntBASIC5.66□□□□□ -1.5
SLC44A4Q53GD3 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC5.66□□□□□ -1.5
SLC44A4Q53GD3 AL136231.1-201ENST00000429407 730 ntBASIC5.66□□□□□ -1.5
SLC44A4Q53GD3 PTGES3P1-201ENST00000439531 483 ntBASIC5.66□□□□□ -1.5
SLC44A4Q53GD3 AC092685.1-201ENST00000447960 1243 ntBASIC5.66□□□□□ -1.5
SLC44A4Q53GD3 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC5.66□□□□□ -1.5
SLC44A4Q53GD3 MEMO1P4-201ENST00000453590 386 ntBASIC5.66□□□□□ -1.5
SLC44A4Q53GD3 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SLC44A4Q53GD3 AC091544.1-201ENST00000484702 348 ntBASIC5.66□□□□□ -1.5
SLC44A4Q53GD3 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SLC44A4Q53GD3 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC5.66□□□□□ -1.5
SLC44A4Q53GD3 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC5.66□□□□□ -1.5
SLC44A4Q53GD3 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC5.66□□□□□ -1.5
SLC44A4Q53GD3 RNU6-941P-201ENST00000516346 108 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 135.6 ms