Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC4.55□□□□□ -1.68
SHMT2P34897 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.55□□□□□ -1.68
SHMT2P34897 MTND5P23-201ENST00000430812 1655 ntBASIC4.54□□□□□ -1.68
SHMT2P34897 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.54□□□□□ -1.68
SHMT2P34897 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SHMT2P34897 ZNF137P-201ENST00000456718 1920 ntBASIC4.54□□□□□ -1.68
SHMT2P34897 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SHMT2P34897 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
SHMT2P34897 AC017104.4-201ENST00000636283 1592 ntBASIC4.54□□□□□ -1.68
SHMT2P34897 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
SHMT2P34897 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.54□□□□□ -1.68
SHMT2P34897 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.54□□□□□ -1.68
SHMT2P34897 AC079741.1-201ENST00000321498 212 ntBASIC4.54□□□□□ -1.68
SHMT2P34897 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
SHMT2P34897 RN7SKP115-201ENST00000363177 317 ntBASIC4.54□□□□□ -1.68
SHMT2P34897 ARL4AP5-201ENST00000404372 599 ntBASIC4.54□□□□□ -1.68
SHMT2P34897 RNA5SP146-201ENST00000410743 123 ntBASIC4.54□□□□□ -1.68
SHMT2P34897 RN7SKP106-201ENST00000410832 272 ntBASIC4.54□□□□□ -1.68
SHMT2P34897 SEPT7P8-201ENST00000413308 775 ntBASIC4.54□□□□□ -1.68
SHMT2P34897 RAB9AP4-201ENST00000415230 609 ntBASIC4.54□□□□□ -1.68
SHMT2P34897 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC4.54□□□□□ -1.68
SHMT2P34897 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.54□□□□□ -1.68
SHMT2P34897 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SHMT2P34897 AL691447.1-201ENST00000419456 387 ntBASIC4.54□□□□□ -1.68
SHMT2P34897 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SHMT2P34897 TPTE2P1-204ENST00000435256 593 ntBASIC4.54□□□□□ -1.68
SHMT2P34897 AL450263.2-201ENST00000439400 589 ntBASIC4.54□□□□□ -1.68
SHMT2P34897 AL138878.2-201ENST00000440581 1241 ntBASIC4.54□□□□□ -1.68
SHMT2P34897 RPL36AP15-201ENST00000444514 266 ntBASIC4.54□□□□□ -1.68
SHMT2P34897 AC104651.2-201ENST00000447549 528 ntBASIC4.54□□□□□ -1.68
SHMT2P34897 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.54□□□□□ -1.68
SHMT2P34897 RN7SL817P-201ENST00000480777 288 ntBASIC4.54□□□□□ -1.68
SHMT2P34897 NIP7P2-201ENST00000485801 544 ntBASIC4.54□□□□□ -1.68
SHMT2P34897 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC4.54□□□□□ -1.68
SHMT2P34897 AL121839.1-201ENST00000556233 1185 ntBASIC4.54□□□□□ -1.68
SHMT2P34897 AC079075.1-201ENST00000559543 878 ntBASIC4.54□□□□□ -1.68
SHMT2P34897 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.54□□□□□ -1.68
SHMT2P34897 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.54□□□□□ -1.68
SHMT2P34897 MIR4700-201ENST00000578311 74 ntBASIC4.54□□□□□ -1.68
SHMT2P34897 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.54□□□□□ -1.68
SHMT2P34897 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.54□□□□□ -1.68
SHMT2P34897 AC124856.1-201ENST00000600819 896 ntBASIC4.54□□□□□ -1.68
SHMT2P34897 MIR6820-201ENST00000611508 62 ntBASIC4.54□□□□□ -1.68
SHMT2P34897 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.54□□□□□ -1.68
SHMT2P34897 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.54□□□□□ -1.68
SHMT2P34897 AC005332.5-201ENST00000591222 2919 ntBASIC4.54□□□□□ -1.68
SHMT2P34897 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
SHMT2P34897 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SHMT2P34897 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.54□□□□□ -1.68
SHMT2P34897 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SHMT2P34897 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SHMT2P34897 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.53□□□□□ -1.68
SHMT2P34897 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SHMT2P34897 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
SHMT2P34897 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SHMT2P34897 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SHMT2P34897 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
SHMT2P34897 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
SHMT2P34897 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SHMT2P34897 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
SHMT2P34897 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SHMT2P34897 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.53□□□□□ -1.68
SHMT2P34897 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SHMT2P34897 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SHMT2P34897 MAPK10-286ENST00000641208 8747 ntBASIC4.53□□□□□ -1.68
SHMT2P34897 RN7SKP224-201ENST00000364140 325 ntBASIC4.53□□□□□ -1.68
SHMT2P34897 MIR192-201ENST00000384915 110 ntBASIC4.53□□□□□ -1.68
SHMT2P34897 CYB5AP4-201ENST00000396692 399 ntBASIC4.53□□□□□ -1.68
SHMT2P34897 RPS4XP9-201ENST00000405151 780 ntBASIC4.53□□□□□ -1.68
SHMT2P34897 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.53□□□□□ -1.68
SHMT2P34897 AC119751.6-201ENST00000416712 186 ntBASIC4.53□□□□□ -1.68
SHMT2P34897 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.53□□□□□ -1.68
SHMT2P34897 RPL7P57-201ENST00000423238 740 ntBASIC4.53□□□□□ -1.68
SHMT2P34897 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC4.53□□□□□ -1.68
SHMT2P34897 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.53□□□□□ -1.68
SHMT2P34897 ARL4AP3-201ENST00000441452 574 ntBASIC4.53□□□□□ -1.68
SHMT2P34897 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
SHMT2P34897 RPL36AP41-201ENST00000493820 306 ntBASIC4.53□□□□□ -1.68
SHMT2P34897 AC098799.3-201ENST00000506095 438 ntBASIC4.53□□□□□ -1.68
SHMT2P34897 NPM1P52-201ENST00000518264 846 ntBASIC4.53□□□□□ -1.68
SHMT2P34897 AC134698.5-201ENST00000519444 336 ntBASIC4.53□□□□□ -1.68
SHMT2P34897 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.53□□□□□ -1.68
SHMT2P34897 OR5M2P-201ENST00000529003 936 ntBASIC4.53□□□□□ -1.68
SHMT2P34897 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.53□□□□□ -1.68
SHMT2P34897 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.53□□□□□ -1.68
SHMT2P34897 AC137768.1-201ENST00000549998 553 ntBASIC4.53□□□□□ -1.68
SHMT2P34897 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SHMT2P34897 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.53□□□□□ -1.68
SHMT2P34897 AC068790.7-201ENST00000602347 528 ntBASIC4.53□□□□□ -1.68
SHMT2P34897 AC117490.2-201ENST00000610042 594 ntBASIC4.53□□□□□ -1.68
SHMT2P34897 AL159169.2-201ENST00000610061 1269 ntBASIC4.53□□□□□ -1.68
SHMT2P34897 AC107905.1-201ENST00000616204 426 ntBASIC4.53□□□□□ -1.68
SHMT2P34897 AC140113.4-201ENST00000622087 222 ntBASIC4.53□□□□□ -1.68
SHMT2P34897 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.53□□□□□ -1.68
SHMT2P34897 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.53□□□□□ -1.68
SHMT2P34897 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SHMT2P34897 AL031119.1-201ENST00000404707 1879 ntBASIC4.53□□□□□ -1.68
SHMT2P34897 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SHMT2P34897 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.53□□□□□ -1.68
SHMT2P34897 DDX18P3-201ENST00000404856 2007 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms