Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
RXRBP28702 AC119674.1-213ENST00000641177 1386 ntBASIC7.33□□□□□ -1.24
RXRBP28702 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
RXRBP28702 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC7.32□□□□□ -1.24
RXRBP28702 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC7.32□□□□□ -1.24
RXRBP28702 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
RXRBP28702 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC7.32□□□□□ -1.24
RXRBP28702 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
RXRBP28702 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
RXRBP28702 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
RXRBP28702 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC7.32□□□□□ -1.24
RXRBP28702 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC7.32□□□□□ -1.24
RXRBP28702 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
RXRBP28702 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
RXRBP28702 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC7.32□□□□□ -1.24
RXRBP28702 RNU1-24P-201ENST00000364285 165 ntBASIC7.32□□□□□ -1.24
RXRBP28702 Y_RNA.248-201ENST00000364501 109 ntBASIC7.32□□□□□ -1.24
RXRBP28702 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
RXRBP28702 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC7.32□□□□□ -1.24
RXRBP28702 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC7.32□□□□□ -1.24
RXRBP28702 AL590084.1-201ENST00000407885 387 ntBASIC7.32□□□□□ -1.24
RXRBP28702 AL161449.1-201ENST00000414531 1199 ntBASIC7.32□□□□□ -1.24
RXRBP28702 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC7.32□□□□□ -1.24
RXRBP28702 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC7.32□□□□□ -1.24
RXRBP28702 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC7.32□□□□□ -1.24
RXRBP28702 AL139415.2-201ENST00000431968 163 ntBASIC7.32□□□□□ -1.24
RXRBP28702 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC7.32□□□□□ -1.24
RXRBP28702 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC7.32□□□□□ -1.24
RXRBP28702 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC7.32□□□□□ -1.24
RXRBP28702 SEPT7P3-201ENST00000455017 621 ntBASIC7.32□□□□□ -1.24
RXRBP28702 AC104763.1-201ENST00000475274 360 ntBASIC7.32□□□□□ -1.24
RXRBP28702 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC7.32□□□□□ -1.24
RXRBP28702 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC7.32□□□□□ -1.24
RXRBP28702 AC133963.2-201ENST00000513686 578 ntBASIC7.32□□□□□ -1.24
RXRBP28702 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC7.32□□□□□ -1.24
RXRBP28702 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
RXRBP28702 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC7.32□□□□□ -1.24
RXRBP28702 UBE2FP2-201ENST00000566646 462 ntBASIC7.32□□□□□ -1.24
RXRBP28702 AC106734.1-201ENST00000568646 663 ntBASIC7.32□□□□□ -1.24
RXRBP28702 CASC22-201ENST00000569713 386 ntTSL 5 BASIC7.32□□□□□ -1.24
RXRBP28702 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC7.32□□□□□ -1.24
RXRBP28702 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC7.32□□□□□ -1.24
RXRBP28702 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC7.32□□□□□ -1.24
RXRBP28702 AL021368.3-201ENST00000607119 578 ntBASIC7.32□□□□□ -1.24
RXRBP28702 AC126118.1-201ENST00000607744 628 ntBASIC7.32□□□□□ -1.24
RXRBP28702 AC009878.1-201ENST00000621819 340 ntBASIC7.32□□□□□ -1.24
RXRBP28702 AL356121.2-201ENST00000624715 780 ntBASIC7.32□□□□□ -1.24
RXRBP28702 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC7.32□□□□□ -1.24
RXRBP28702 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC7.32□□□□□ -1.24
RXRBP28702 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC7.32□□□□□ -1.24
RXRBP28702 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC7.32□□□□□ -1.24
RXRBP28702 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
RXRBP28702 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
RXRBP28702 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
RXRBP28702 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
RXRBP28702 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
RXRBP28702 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
RXRBP28702 AC010329.1-201ENST00000593903 8328 ntBASIC7.32□□□□□ -1.24
RXRBP28702 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC7.32□□□□□ -1.24
RXRBP28702 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC7.32□□□□□ -1.24
RXRBP28702 ASNSP1-204ENST00000641977 1664 ntBASIC7.32□□□□□ -1.24
RXRBP28702 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC7.31□□□□□ -1.24
RXRBP28702 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
RXRBP28702 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC7.31□□□□□ -1.24
RXRBP28702 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
RXRBP28702 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
RXRBP28702 LCMT1-AS2-202ENST00000565214 5666 ntBASIC7.31□□□□□ -1.24
RXRBP28702 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
RXRBP28702 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC7.31□□□□□ -1.24
RXRBP28702 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
RXRBP28702 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC7.31□□□□□ -1.24
RXRBP28702 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC7.31□□□□□ -1.24
RXRBP28702 SNORA16A-201ENST00000384342 137 ntBASIC7.31□□□□□ -1.24
RXRBP28702 RPL7P53-201ENST00000421245 739 ntBASIC7.31□□□□□ -1.24
RXRBP28702 AC004074.1-201ENST00000421810 1063 ntBASIC7.31□□□□□ -1.24
RXRBP28702 ZDHHC20P2-201ENST00000424108 429 ntBASIC7.31□□□□□ -1.24
RXRBP28702 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC7.31□□□□□ -1.24
RXRBP28702 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC7.31□□□□□ -1.24
RXRBP28702 ZNF863P-201ENST00000426746 417 ntBASIC7.31□□□□□ -1.24
RXRBP28702 OR2B8P-201ENST00000432841 938 ntBASIC7.31□□□□□ -1.24
RXRBP28702 MTND1P32-201ENST00000433043 938 ntBASIC7.31□□□□□ -1.24
RXRBP28702 ARL5AP3-201ENST00000439327 386 ntBASIC7.31□□□□□ -1.24
RXRBP28702 RPL6P5-201ENST00000445678 828 ntBASIC7.31□□□□□ -1.24
RXRBP28702 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC7.31□□□□□ -1.24
RXRBP28702 AL592447.1-201ENST00000447592 540 ntBASIC7.31□□□□□ -1.24
RXRBP28702 AL096803.2-201ENST00000450032 677 ntBASIC7.31□□□□□ -1.24
RXRBP28702 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC7.31□□□□□ -1.24
RXRBP28702 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC7.31□□□□□ -1.24
RXRBP28702 AL603882.1-201ENST00000463059 681 ntBASIC7.31□□□□□ -1.24
RXRBP28702 RPL38P3-201ENST00000484463 213 ntBASIC7.31□□□□□ -1.24
RXRBP28702 AP002963.1-201ENST00000530590 184 ntBASIC7.31□□□□□ -1.24
RXRBP28702 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
RXRBP28702 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC7.31□□□□□ -1.24
RXRBP28702 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC7.31□□□□□ -1.24
RXRBP28702 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC7.31□□□□□ -1.24
RXRBP28702 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC7.31□□□□□ -1.24
RXRBP28702 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC7.31□□□□□ -1.24
RXRBP28702 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC7.31□□□□□ -1.24
RXRBP28702 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC7.31□□□□□ -1.24
RXRBP28702 AC079089.3-201ENST00000603094 673 ntBASIC7.31□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms