Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC6.51□□□□□ -1.37
HMGB1P09429 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC6.51□□□□□ -1.37
HMGB1P09429 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC6.51□□□□□ -1.37
HMGB1P09429 UBE2V1P1-201ENST00000430836 445 ntBASIC6.51□□□□□ -1.37
HMGB1P09429 SUMO2P3-201ENST00000438311 288 ntBASIC6.51□□□□□ -1.37
HMGB1P09429 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC6.51□□□□□ -1.37
HMGB1P09429 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC6.51□□□□□ -1.37
HMGB1P09429 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
HMGB1P09429 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC6.51□□□□□ -1.37
HMGB1P09429 AC093755.1-201ENST00000512950 1023 ntBASIC6.51□□□□□ -1.37
HMGB1P09429 TMEM97P2-201ENST00000517841 403 ntBASIC6.51□□□□□ -1.37
HMGB1P09429 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC6.51□□□□□ -1.37
HMGB1P09429 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
HMGB1P09429 AP003066.2-201ENST00000529375 555 ntBASIC6.51□□□□□ -1.37
HMGB1P09429 OR4A43P-201ENST00000532938 908 ntBASIC6.51□□□□□ -1.37
HMGB1P09429 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC6.51□□□□□ -1.37
HMGB1P09429 MYL6-213ENST00000549017 502 ntTSL 3 BASIC6.51□□□□□ -1.37
HMGB1P09429 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC6.51□□□□□ -1.37
HMGB1P09429 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC6.51□□□□□ -1.37
HMGB1P09429 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC6.51□□□□□ -1.37
HMGB1P09429 PRPF19P1-201ENST00000584766 898 ntBASIC6.51□□□□□ -1.37
HMGB1P09429 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC6.51□□□□□ -1.37
HMGB1P09429 AC005377.1-201ENST00000605126 456 ntBASIC6.51□□□□□ -1.37
HMGB1P09429 AL162574.1-201ENST00000615702 950 ntBASIC6.51□□□□□ -1.37
HMGB1P09429 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC6.51□□□□□ -1.37
HMGB1P09429 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC6.51□□□□□ -1.37
HMGB1P09429 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
HMGB1P09429 AC073869.8-201ENST00000641806 335 ntBASIC6.51□□□□□ -1.37
HMGB1P09429 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC6.51□□□□□ -1.37
HMGB1P09429 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC6.51□□□□□ -1.37
HMGB1P09429 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC6.51□□□□□ -1.37
HMGB1P09429 SMG1P4-204ENST00000523028 4131 ntBASIC6.51□□□□□ -1.37
HMGB1P09429 TMEM161BP1-201ENST00000457388 1457 ntBASIC6.51□□□□□ -1.37
HMGB1P09429 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
HMGB1P09429 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
HMGB1P09429 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
HMGB1P09429 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
HMGB1P09429 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
HMGB1P09429 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC6.51□□□□□ -1.37
HMGB1P09429 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC6.5□□□□□ -1.37
HMGB1P09429 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
HMGB1P09429 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC6.5□□□□□ -1.37
HMGB1P09429 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
HMGB1P09429 AL592182.3-201ENST00000642132 3304 ntBASIC6.5□□□□□ -1.37
HMGB1P09429 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC6.5□□□□□ -1.37
HMGB1P09429 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
HMGB1P09429 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
HMGB1P09429 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC6.5□□□□□ -1.37
HMGB1P09429 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC6.5□□□□□ -1.37
HMGB1P09429 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC6.5□□□□□ -1.37
HMGB1P09429 EIF2AP4-201ENST00000424793 1781 ntBASIC6.5□□□□□ -1.37
HMGB1P09429 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
HMGB1P09429 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC6.5□□□□□ -1.37
HMGB1P09429 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
HMGB1P09429 SNORA70.6-201ENST00000383934 134 ntBASIC6.5□□□□□ -1.37
HMGB1P09429 AL035405.1-201ENST00000400795 710 ntBASIC6.5□□□□□ -1.37
HMGB1P09429 AL603865.2-201ENST00000401679 213 ntBASIC6.5□□□□□ -1.37
HMGB1P09429 AL078604.1-201ENST00000404609 466 ntBASIC6.5□□□□□ -1.37
HMGB1P09429 RN7SKP59-201ENST00000410520 314 ntBASIC6.5□□□□□ -1.37
HMGB1P09429 UBE2V1P9-201ENST00000414760 368 ntBASIC6.5□□□□□ -1.37
HMGB1P09429 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC6.5□□□□□ -1.37
HMGB1P09429 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC6.5□□□□□ -1.37
HMGB1P09429 RPL12P17-201ENST00000432393 498 ntBASIC6.5□□□□□ -1.37
HMGB1P09429 RPS7P2-201ENST00000435134 607 ntBASIC6.5□□□□□ -1.37
HMGB1P09429 AL645931.1-201ENST00000439737 410 ntBASIC6.5□□□□□ -1.37
HMGB1P09429 EEF1B2P6-201ENST00000445713 673 ntBASIC6.5□□□□□ -1.37
HMGB1P09429 AP000797.2-201ENST00000475768 606 ntBASIC6.5□□□□□ -1.37
HMGB1P09429 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC6.5□□□□□ -1.37
HMGB1P09429 AC119751.1-201ENST00000513357 765 ntBASIC6.5□□□□□ -1.37
HMGB1P09429 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC6.5□□□□□ -1.37
HMGB1P09429 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC6.5□□□□□ -1.37
HMGB1P09429 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC6.5□□□□□ -1.37
HMGB1P09429 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC6.5□□□□□ -1.37
HMGB1P09429 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC6.5□□□□□ -1.37
HMGB1P09429 OR5AZ1P-201ENST00000527448 943 ntBASIC6.5□□□□□ -1.37
HMGB1P09429 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC6.5□□□□□ -1.37
HMGB1P09429 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
HMGB1P09429 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC6.5□□□□□ -1.37
HMGB1P09429 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC6.5□□□□□ -1.37
HMGB1P09429 AC090666.1-201ENST00000578241 445 ntBASIC6.5□□□□□ -1.37
HMGB1P09429 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC6.5□□□□□ -1.37
HMGB1P09429 MRO-208ENST00000588444 866 ntTSL 3 BASIC6.5□□□□□ -1.37
HMGB1P09429 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
HMGB1P09429 AC083899.3-201ENST00000603413 594 ntBASIC6.5□□□□□ -1.37
HMGB1P09429 AP004247.3-201ENST00000608682 624 ntBASIC6.5□□□□□ -1.37
HMGB1P09429 AC010632.3-201ENST00000611377 369 ntBASIC6.5□□□□□ -1.37
HMGB1P09429 AC139713.2-210ENST00000641741 992 ntBASIC6.5□□□□□ -1.37
HMGB1P09429 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
HMGB1P09429 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC6.5□□□□□ -1.37
HMGB1P09429 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC6.5□□□□□ -1.37
HMGB1P09429 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
HMGB1P09429 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC6.5□□□□□ -1.37
HMGB1P09429 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
HMGB1P09429 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
HMGB1P09429 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC6.5□□□□□ -1.37
HMGB1P09429 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
HMGB1P09429 GHR-202ENST00000357703 4316 ntTSL 5 BASIC6.49□□□□□ -1.37
HMGB1P09429 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
HMGB1P09429 AL360270.2-201ENST00000562952 5985 ntBASIC6.49□□□□□ -1.37
HMGB1P09429 NMD3P1-201ENST00000439704 1488 ntBASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms