Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AL389915.2-201ENST00000454576 441 ntBASIC3.48□□□□□ -1.85
CXCL1P09341 NDUFA5P5-201ENST00000468361 342 ntBASIC3.48□□□□□ -1.85
CXCL1P09341 AC108693.1-201ENST00000496068 432 ntBASIC3.48□□□□□ -1.85
CXCL1P09341 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC3.48□□□□□ -1.85
CXCL1P09341 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC3.48□□□□□ -1.85
CXCL1P09341 PRELID3BP7-201ENST00000503606 469 ntBASIC3.48□□□□□ -1.85
CXCL1P09341 AC017037.1-201ENST00000508460 471 ntBASIC3.48□□□□□ -1.85
CXCL1P09341 BX510359.5-201ENST00000515651 304 ntBASIC3.48□□□□□ -1.85
CXCL1P09341 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.48□□□□□ -1.85
CXCL1P09341 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC3.48□□□□□ -1.85
CXCL1P09341 RN7SL802P-201ENST00000577858 299 ntBASIC3.48□□□□□ -1.85
CXCL1P09341 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC3.48□□□□□ -1.85
CXCL1P09341 AL627230.1-201ENST00000613077 211 ntBASIC3.48□□□□□ -1.85
CXCL1P09341 RN7SL722P-201ENST00000617780 284 ntBASIC3.48□□□□□ -1.85
CXCL1P09341 RN7SL565P-201ENST00000618246 284 ntBASIC3.48□□□□□ -1.85
CXCL1P09341 LDHA-225ENST00000625635 141 ntTSL 5 BASIC3.48□□□□□ -1.85
CXCL1P09341 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CXCL1P09341 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CXCL1P09341 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.48□□□□□ -1.85
CXCL1P09341 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CXCL1P09341 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.48□□□□□ -1.85
CXCL1P09341 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC3.47□□□□□ -1.85
CXCL1P09341 OR11H5P-202ENST00000641612 1325 ntBASIC3.47□□□□□ -1.85
CXCL1P09341 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
CXCL1P09341 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.47□□□□□ -1.85
CXCL1P09341 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CXCL1P09341 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.47□□□□□ -1.85
CXCL1P09341 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CXCL1P09341 SNURFL-201ENST00000309296 343 ntBASIC3.47□□□□□ -1.85
CXCL1P09341 TMSB4XP4-201ENST00000323496 618 ntBASIC3.47□□□□□ -1.85
CXCL1P09341 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
CXCL1P09341 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
CXCL1P09341 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC3.47□□□□□ -1.85
CXCL1P09341 AC019155.1-201ENST00000382242 574 ntBASIC3.47□□□□□ -1.85
CXCL1P09341 Z98941.1-201ENST00000407764 100 ntBASIC3.47□□□□□ -1.85
CXCL1P09341 DPPA2P3-201ENST00000411853 655 ntBASIC3.47□□□□□ -1.85
CXCL1P09341 GTF2IP5-201ENST00000414608 731 ntBASIC3.47□□□□□ -1.85
CXCL1P09341 AC009302.1-201ENST00000417147 390 ntBASIC3.47□□□□□ -1.85
CXCL1P09341 AF186996.5-201ENST00000418098 904 ntBASIC3.47□□□□□ -1.85
CXCL1P09341 IPPKP1-201ENST00000422501 768 ntBASIC3.47□□□□□ -1.85
CXCL1P09341 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC3.47□□□□□ -1.85
CXCL1P09341 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC3.47□□□□□ -1.85
CXCL1P09341 AP000936.3-201ENST00000438127 255 ntBASIC3.47□□□□□ -1.85
CXCL1P09341 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC3.47□□□□□ -1.85
CXCL1P09341 RPL23AP89-201ENST00000439324 255 ntBASIC3.47□□□□□ -1.85
CXCL1P09341 RPL34P20-201ENST00000442771 351 ntBASIC3.47□□□□□ -1.85
CXCL1P09341 AL162388.1-201ENST00000450912 352 ntBASIC3.47□□□□□ -1.85
CXCL1P09341 AC092647.2-201ENST00000452998 253 ntBASIC3.47□□□□□ -1.85
CXCL1P09341 RPL10P17-201ENST00000453852 316 ntBASIC3.47□□□□□ -1.85
CXCL1P09341 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC3.47□□□□□ -1.85
CXCL1P09341 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC3.47□□□□□ -1.85
CXCL1P09341 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC3.47□□□□□ -1.85
CXCL1P09341 RN7SL808P-201ENST00000496066 299 ntBASIC3.47□□□□□ -1.85
CXCL1P09341 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC3.47□□□□□ -1.85
CXCL1P09341 PGAM1P13-201ENST00000507497 754 ntBASIC3.47□□□□□ -1.85
CXCL1P09341 AC109458.1-201ENST00000508858 316 ntBASIC3.47□□□□□ -1.85
CXCL1P09341 SSX6-203ENST00000509958 336 ntTSL 3 BASIC3.47□□□□□ -1.85
CXCL1P09341 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CXCL1P09341 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CXCL1P09341 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
CXCL1P09341 AC023762.1-201ENST00000603280 584 ntBASIC3.47□□□□□ -1.85
CXCL1P09341 AP001521.2-201ENST00000608772 546 ntBASIC3.47□□□□□ -1.85
CXCL1P09341 AL359513.1-201ENST00000614364 557 ntBASIC3.47□□□□□ -1.85
CXCL1P09341 AC126175.1-201ENST00000617041 758 ntBASIC3.47□□□□□ -1.85
CXCL1P09341 AC244100.4-201ENST00000617747 388 ntBASIC3.47□□□□□ -1.85
CXCL1P09341 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC3.47□□□□□ -1.85
CXCL1P09341 TEX41-254ENST00000626394 423 ntTSL 5 BASIC3.47□□□□□ -1.85
CXCL1P09341 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
CXCL1P09341 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC3.47□□□□□ -1.85
CXCL1P09341 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
CXCL1P09341 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
CXCL1P09341 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CXCL1P09341 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
CXCL1P09341 AC010300.1-201ENST00000600671 5134 ntBASIC3.47□□□□□ -1.85
CXCL1P09341 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
CXCL1P09341 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC3.47□□□□□ -1.85
CXCL1P09341 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
CXCL1P09341 ASNSP1-201ENST00000518311 1939 ntBASIC3.46□□□□□ -1.85
CXCL1P09341 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC3.46□□□□□ -1.86
CXCL1P09341 MIR3074-201ENST00000384885 81 ntBASIC3.46□□□□□ -1.86
CXCL1P09341 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
CXCL1P09341 AC104297.1-201ENST00000393779 870 ntBASIC3.46□□□□□ -1.86
CXCL1P09341 GLULP6-201ENST00000399502 913 ntBASIC3.46□□□□□ -1.86
CXCL1P09341 RPL5P19-201ENST00000404228 893 ntBASIC3.46□□□□□ -1.86
CXCL1P09341 AP002530.1-201ENST00000405705 684 ntBASIC3.46□□□□□ -1.86
CXCL1P09341 MIR1183-201ENST00000408856 89 ntBASIC3.46□□□□□ -1.86
CXCL1P09341 RNA5SP178-201ENST00000410380 128 ntBASIC3.46□□□□□ -1.86
CXCL1P09341 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.46□□□□□ -1.86
CXCL1P09341 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CXCL1P09341 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC3.46□□□□□ -1.86
CXCL1P09341 RAD23BP1-201ENST00000421404 1227 ntBASIC3.46□□□□□ -1.86
CXCL1P09341 RPS26P40-201ENST00000435209 294 ntBASIC3.46□□□□□ -1.86
CXCL1P09341 OR52B5P-201ENST00000435337 951 ntBASIC3.46□□□□□ -1.86
CXCL1P09341 AL138787.1-202ENST00000437804 898 ntBASIC3.46□□□□□ -1.86
CXCL1P09341 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC3.46□□□□□ -1.86
CXCL1P09341 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC3.46□□□□□ -1.86
CXCL1P09341 AC090142.1-201ENST00000465776 462 ntBASIC3.46□□□□□ -1.86
CXCL1P09341 AC092905.1-201ENST00000467527 949 ntBASIC3.46□□□□□ -1.86
CXCL1P09341 RN7SL585P-201ENST00000470538 280 ntBASIC3.46□□□□□ -1.86
CXCL1P09341 OR2AO1P-201ENST00000476497 403 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms