Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC5.98□□□□□ -1.45
HLA-DOAP06340 CR383656.6-201ENST00000550518 394 ntBASIC5.98□□□□□ -1.45
HLA-DOAP06340 ZNF321P-202ENST00000550843 495 ntBASIC5.98□□□□□ -1.45
HLA-DOAP06340 ZNF971P-201ENST00000562068 1249 ntBASIC5.98□□□□□ -1.45
HLA-DOAP06340 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.98□□□□□ -1.45
HLA-DOAP06340 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC5.98□□□□□ -1.45
HLA-DOAP06340 AC107952.2-201ENST00000606048 486 ntBASIC5.98□□□□□ -1.45
HLA-DOAP06340 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.98□□□□□ -1.45
HLA-DOAP06340 AC079416.3-201ENST00000624479 549 ntBASIC5.98□□□□□ -1.45
HLA-DOAP06340 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
HLA-DOAP06340 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.98□□□□□ -1.45
HLA-DOAP06340 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
HLA-DOAP06340 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
HLA-DOAP06340 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.98□□□□□ -1.45
HLA-DOAP06340 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.97□□□□□ -1.45
HLA-DOAP06340 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
HLA-DOAP06340 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
HLA-DOAP06340 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.97□□□□□ -1.45
HLA-DOAP06340 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HLA-DOAP06340 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HLA-DOAP06340 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
HLA-DOAP06340 AC132825.1-201ENST00000463573 2247 ntBASIC5.97□□□□□ -1.45
HLA-DOAP06340 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HLA-DOAP06340 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.97□□□□□ -1.45
HLA-DOAP06340 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
HLA-DOAP06340 CD2-201ENST00000369477 478 ntTSL 2 BASIC5.97□□□□□ -1.45
HLA-DOAP06340 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.97□□□□□ -1.45
HLA-DOAP06340 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HLA-DOAP06340 RNU6-207P-201ENST00000384137 107 ntBASIC5.97□□□□□ -1.45
HLA-DOAP06340 RNU6-796P-201ENST00000391086 107 ntBASIC5.97□□□□□ -1.45
HLA-DOAP06340 SKINT1L-201ENST00000401057 817 ntBASIC5.97□□□□□ -1.45
HLA-DOAP06340 SNORA77-201ENST00000408716 125 ntBASIC5.97□□□□□ -1.45
HLA-DOAP06340 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC5.97□□□□□ -1.45
HLA-DOAP06340 UBE2V1P11-201ENST00000411559 285 ntBASIC5.97□□□□□ -1.45
HLA-DOAP06340 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.97□□□□□ -1.45
HLA-DOAP06340 RPS21P8-201ENST00000413365 247 ntBASIC5.97□□□□□ -1.45
HLA-DOAP06340 AF186996.5-201ENST00000418098 904 ntBASIC5.97□□□□□ -1.45
HLA-DOAP06340 RPA2P2-201ENST00000419698 796 ntBASIC5.97□□□□□ -1.45
HLA-DOAP06340 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.97□□□□□ -1.45
HLA-DOAP06340 RPP40P1-201ENST00000426762 456 ntBASIC5.97□□□□□ -1.45
HLA-DOAP06340 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC5.97□□□□□ -1.45
HLA-DOAP06340 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.97□□□□□ -1.45
HLA-DOAP06340 USP9YP24-201ENST00000434374 697 ntBASIC5.97□□□□□ -1.45
HLA-DOAP06340 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC5.97□□□□□ -1.45
HLA-DOAP06340 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.97□□□□□ -1.45
HLA-DOAP06340 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC5.97□□□□□ -1.45
HLA-DOAP06340 VN1R25P-201ENST00000443385 738 ntBASIC5.97□□□□□ -1.45
HLA-DOAP06340 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC5.97□□□□□ -1.45
HLA-DOAP06340 MED28P3-201ENST00000444288 531 ntBASIC5.97□□□□□ -1.45
HLA-DOAP06340 USP9YP17-201ENST00000444617 696 ntBASIC5.97□□□□□ -1.45
HLA-DOAP06340 AC004022.1-201ENST00000447766 1066 ntBASIC5.97□□□□□ -1.45
HLA-DOAP06340 AL157884.3-201ENST00000448273 1184 ntBASIC5.97□□□□□ -1.45
HLA-DOAP06340 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC5.97□□□□□ -1.45
HLA-DOAP06340 RPL23AP23-201ENST00000452590 471 ntBASIC5.97□□□□□ -1.45
HLA-DOAP06340 AC134050.1-201ENST00000495088 933 ntBASIC5.97□□□□□ -1.45
HLA-DOAP06340 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC5.97□□□□□ -1.45
HLA-DOAP06340 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC5.97□□□□□ -1.45
HLA-DOAP06340 OOSP1P2-201ENST00000579644 351 ntBASIC5.97□□□□□ -1.45
HLA-DOAP06340 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC5.97□□□□□ -1.45
HLA-DOAP06340 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.97□□□□□ -1.45
HLA-DOAP06340 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.97□□□□□ -1.45
HLA-DOAP06340 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC5.97□□□□□ -1.45
HLA-DOAP06340 AC005034.4-201ENST00000603612 899 ntBASIC5.97□□□□□ -1.45
HLA-DOAP06340 AC079880.2-201ENST00000603790 1213 ntBASIC5.97□□□□□ -1.45
HLA-DOAP06340 AP001521.2-201ENST00000608772 546 ntBASIC5.97□□□□□ -1.45
HLA-DOAP06340 AC122108.2-201ENST00000611946 526 ntBASIC5.97□□□□□ -1.45
HLA-DOAP06340 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC5.97□□□□□ -1.45
HLA-DOAP06340 AL133370.2-201ENST00000619934 439 ntBASIC5.97□□□□□ -1.45
HLA-DOAP06340 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.97□□□□□ -1.45
HLA-DOAP06340 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
HLA-DOAP06340 AC019080.5-201ENST00000624891 757 ntBASIC5.97□□□□□ -1.45
HLA-DOAP06340 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
HLA-DOAP06340 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HLA-DOAP06340 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.97□□□□□ -1.45
HLA-DOAP06340 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HLA-DOAP06340 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
HLA-DOAP06340 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
HLA-DOAP06340 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.97□□□□□ -1.45
HLA-DOAP06340 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
HLA-DOAP06340 AC018628.1-201ENST00000624147 3819 ntBASIC5.97□□□□□ -1.45
HLA-DOAP06340 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.97□□□□□ -1.45
HLA-DOAP06340 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
HLA-DOAP06340 SDAD1P1-202ENST00000524156 2051 ntBASIC5.97□□□□□ -1.45
HLA-DOAP06340 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.97□□□□□ -1.45
HLA-DOAP06340 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.96□□□□□ -1.45
HLA-DOAP06340 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.45
HLA-DOAP06340 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
HLA-DOAP06340 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
HLA-DOAP06340 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.46
HLA-DOAP06340 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
HLA-DOAP06340 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.46
HLA-DOAP06340 Y_RNA.169-201ENST00000363745 96 ntBASIC5.96□□□□□ -1.46
HLA-DOAP06340 RNU4-28P-201ENST00000364739 141 ntBASIC5.96□□□□□ -1.46
HLA-DOAP06340 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.46
HLA-DOAP06340 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
HLA-DOAP06340 AC234772.1-201ENST00000377927 937 ntBASIC5.96□□□□□ -1.46
HLA-DOAP06340 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC5.96□□□□□ -1.46
HLA-DOAP06340 RNU6-1242P-201ENST00000391052 103 ntBASIC5.96□□□□□ -1.46
HLA-DOAP06340 RPL5P19-201ENST00000404228 893 ntBASIC5.96□□□□□ -1.46
HLA-DOAP06340 MORF4L1P6-201ENST00000418771 268 ntBASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms