Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
CD74P04233 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
CD74P04233 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
CD74P04233 AL136164.3-201ENST00000624429 3978 ntBASIC3.94□□□□□ -1.78
CD74P04233 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC3.94□□□□□ -1.78
CD74P04233 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CD74P04233 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
CD74P04233 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
CD74P04233 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CD74P04233 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
CD74P04233 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CD74P04233 AL645733.1-201ENST00000402250 217 ntBASIC3.94□□□□□ -1.78
CD74P04233 Z97832.1-201ENST00000402490 328 ntBASIC3.94□□□□□ -1.78
CD74P04233 DUTP5-201ENST00000406790 469 ntBASIC3.94□□□□□ -1.78
CD74P04233 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC3.94□□□□□ -1.78
CD74P04233 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC3.94□□□□□ -1.78
CD74P04233 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC3.94□□□□□ -1.78
CD74P04233 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CD74P04233 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CD74P04233 AC022022.1-201ENST00000430304 178 ntBASIC3.94□□□□□ -1.78
CD74P04233 RPL7L1P9-201ENST00000431298 745 ntBASIC3.94□□□□□ -1.78
CD74P04233 RPL7P33-201ENST00000444159 742 ntBASIC3.94□□□□□ -1.78
CD74P04233 CASP3P1-201ENST00000446037 609 ntBASIC3.94□□□□□ -1.78
CD74P04233 SEPT14P1-201ENST00000458703 648 ntBASIC3.94□□□□□ -1.78
CD74P04233 TSACC-207ENST00000470342 601 ntTSL 2 BASIC3.94□□□□□ -1.78
CD74P04233 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC3.94□□□□□ -1.78
CD74P04233 AC006499.6-201ENST00000511169 607 ntBASIC3.94□□□□□ -1.78
CD74P04233 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC3.94□□□□□ -1.78
CD74P04233 RNA5SP34-201ENST00000516887 130 ntBASIC3.94□□□□□ -1.78
CD74P04233 IGHVII-44-2-201ENST00000517728 250 ntBASIC3.94□□□□□ -1.78
CD74P04233 VTA1P2-201ENST00000520205 911 ntBASIC3.94□□□□□ -1.78
CD74P04233 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC3.94□□□□□ -1.78
CD74P04233 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CD74P04233 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CD74P04233 AC068446.3-201ENST00000555285 382 ntBASIC3.94□□□□□ -1.78
CD74P04233 AC124068.1-201ENST00000563131 678 ntBASIC3.94□□□□□ -1.78
CD74P04233 RN7SL802P-201ENST00000577858 299 ntBASIC3.94□□□□□ -1.78
CD74P04233 MIR5699-201ENST00000578903 90 ntBASIC3.94□□□□□ -1.78
CD74P04233 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC3.94□□□□□ -1.78
CD74P04233 AP005212.4-201ENST00000614206 710 ntBASIC3.94□□□□□ -1.78
CD74P04233 AC004808.2-201ENST00000627965 773 ntBASIC3.94□□□□□ -1.78
CD74P04233 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC3.94□□□□□ -1.78
CD74P04233 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.94□□□□□ -1.78
CD74P04233 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
CD74P04233 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CD74P04233 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC3.94□□□□□ -1.78
CD74P04233 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
CD74P04233 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CD74P04233 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
CD74P04233 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC3.93□□□□□ -1.78
CD74P04233 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CD74P04233 EEF1A1P36-201ENST00000427807 1351 ntBASIC3.93□□□□□ -1.78
CD74P04233 RNA5SP428-201ENST00000365129 132 ntBASIC3.93□□□□□ -1.78
CD74P04233 MIR105-2-201ENST00000385083 81 ntBASIC3.93□□□□□ -1.78
CD74P04233 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CD74P04233 HSPD1P16-201ENST00000402302 394 ntBASIC3.93□□□□□ -1.78
CD74P04233 OR51B3P-201ENST00000412287 913 ntBASIC3.93□□□□□ -1.78
CD74P04233 AP000534.2-201ENST00000412729 568 ntBASIC3.93□□□□□ -1.78
CD74P04233 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC3.93□□□□□ -1.78
CD74P04233 GTF2IP5-201ENST00000414608 731 ntBASIC3.93□□□□□ -1.78
CD74P04233 RPL6P29-201ENST00000414863 865 ntBASIC3.93□□□□□ -1.78
CD74P04233 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC3.93□□□□□ -1.78
CD74P04233 AC004552.1-201ENST00000419089 348 ntBASIC3.93□□□□□ -1.78
CD74P04233 AC093084.1-201ENST00000424233 687 ntBASIC3.93□□□□□ -1.78
CD74P04233 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC3.93□□□□□ -1.78
CD74P04233 MTND2P2-201ENST00000434633 945 ntBASIC3.93□□□□□ -1.78
CD74P04233 AL627308.1-201ENST00000435693 821 ntBASIC3.93□□□□□ -1.78
CD74P04233 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC3.93□□□□□ -1.78
CD74P04233 AL353748.1-201ENST00000440753 474 ntBASIC3.93□□□□□ -1.78
CD74P04233 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC3.93□□□□□ -1.78
CD74P04233 AL137845.2-201ENST00000444292 988 ntBASIC3.93□□□□□ -1.78
CD74P04233 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC3.93□□□□□ -1.78
CD74P04233 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC3.93□□□□□ -1.78
CD74P04233 FGF7P3-201ENST00000454645 303 ntBASIC3.93□□□□□ -1.78
CD74P04233 RPL23AP56-201ENST00000460778 453 ntBASIC3.93□□□□□ -1.78
CD74P04233 RPS26P3-201ENST00000470205 348 ntBASIC3.93□□□□□ -1.78
CD74P04233 AC090543.2-201ENST00000483963 348 ntBASIC3.93□□□□□ -1.78
CD74P04233 AC004057.1-201ENST00000485827 348 ntBASIC3.93□□□□□ -1.78
CD74P04233 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC3.93□□□□□ -1.78
CD74P04233 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CD74P04233 PGAM1P13-201ENST00000507497 754 ntBASIC3.93□□□□□ -1.78
CD74P04233 SNORD116-30-201ENST00000516468 85 ntBASIC3.93□□□□□ -1.78
CD74P04233 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.93□□□□□ -1.78
CD74P04233 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CD74P04233 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.93□□□□□ -1.78
CD74P04233 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC3.93□□□□□ -1.78
CD74P04233 AC090515.3-201ENST00000560431 315 ntBASIC3.93□□□□□ -1.78
CD74P04233 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CD74P04233 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC3.93□□□□□ -1.78
CD74P04233 AC016180.1-201ENST00000567945 403 ntBASIC3.93□□□□□ -1.78
CD74P04233 FAM106CP-201ENST00000582212 507 ntBASIC3.93□□□□□ -1.78
CD74P04233 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.93□□□□□ -1.78
CD74P04233 OR1AB1P-201ENST00000585564 761 ntBASIC3.93□□□□□ -1.78
CD74P04233 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC3.93□□□□□ -1.78
CD74P04233 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC3.93□□□□□ -1.78
CD74P04233 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC3.93□□□□□ -1.78
CD74P04233 AC023762.1-201ENST00000603280 584 ntBASIC3.93□□□□□ -1.78
CD74P04233 AP002360.3-201ENST00000607673 710 ntBASIC3.93□□□□□ -1.78
CD74P04233 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
CD74P04233 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms