Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 RNU6-1192P-201ENST00000612197 107 ntBASIC4.61□□□□□ -1.67
PRKNO60260 RNU6-489P-201ENST00000618289 107 ntBASIC4.61□□□□□ -1.67
PRKNO60260 AL512427.1-201ENST00000618593 349 ntBASIC4.61□□□□□ -1.67
PRKNO60260 AC091953.3-201ENST00000623220 236 ntBASIC4.61□□□□□ -1.67
PRKNO60260 AC092159.4-201ENST00000624944 550 ntBASIC4.61□□□□□ -1.67
PRKNO60260 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC4.61□□□□□ -1.67
PRKNO60260 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.61□□□□□ -1.67
PRKNO60260 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC4.61□□□□□ -1.67
PRKNO60260 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC4.61□□□□□ -1.67
PRKNO60260 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PRKNO60260 WAC-209ENST00000428935 1320 ntTSL 2 BASIC4.61□□□□□ -1.67
PRKNO60260 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.61□□□□□ -1.67
PRKNO60260 AC132825.1-201ENST00000463573 2247 ntBASIC4.61□□□□□ -1.67
PRKNO60260 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.61□□□□□ -1.67
PRKNO60260 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PRKNO60260 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
PRKNO60260 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
PRKNO60260 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PRKNO60260 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.6□□□□□ -1.67
PRKNO60260 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PRKNO60260 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.6□□□□□ -1.67
PRKNO60260 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.6□□□□□ -1.67
PRKNO60260 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PRKNO60260 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.6□□□□□ -1.67
PRKNO60260 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
PRKNO60260 AC103591.2-201ENST00000265259 766 ntBASIC4.6□□□□□ -1.67
PRKNO60260 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.6□□□□□ -1.67
PRKNO60260 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.6□□□□□ -1.67
PRKNO60260 RNU6-249P-201ENST00000363016 102 ntBASIC4.6□□□□□ -1.67
PRKNO60260 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
PRKNO60260 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
PRKNO60260 RNU6-1005P-201ENST00000384519 107 ntBASIC4.6□□□□□ -1.67
PRKNO60260 AL357515.1-201ENST00000402967 542 ntBASIC4.6□□□□□ -1.67
PRKNO60260 SNORA79B-201ENST00000410557 148 ntBASIC4.6□□□□□ -1.67
PRKNO60260 AC096533.1-201ENST00000411645 353 ntBASIC4.6□□□□□ -1.67
PRKNO60260 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.6□□□□□ -1.67
PRKNO60260 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.6□□□□□ -1.67
PRKNO60260 COX6B1P1-201ENST00000415962 213 ntBASIC4.6□□□□□ -1.67
PRKNO60260 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC4.6□□□□□ -1.67
PRKNO60260 QRSL1P2-201ENST00000418582 964 ntBASIC4.6□□□□□ -1.67
PRKNO60260 TCEA1P2-201ENST00000420496 906 ntBASIC4.6□□□□□ -1.67
PRKNO60260 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC4.6□□□□□ -1.67
PRKNO60260 MTCO1P43-201ENST00000431831 488 ntBASIC4.6□□□□□ -1.67
PRKNO60260 AC093414.1-201ENST00000434712 514 ntBASIC4.6□□□□□ -1.67
PRKNO60260 MTCYBP29-201ENST00000436327 1006 ntBASIC4.6□□□□□ -1.67
PRKNO60260 PRPF38AP2-201ENST00000438179 851 ntBASIC4.6□□□□□ -1.67
PRKNO60260 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.6□□□□□ -1.67
PRKNO60260 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.6□□□□□ -1.67
PRKNO60260 RPL7P33-201ENST00000444159 742 ntBASIC4.6□□□□□ -1.67
PRKNO60260 AC004980.3-201ENST00000447046 365 ntBASIC4.6□□□□□ -1.67
PRKNO60260 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.6□□□□□ -1.67
PRKNO60260 AC069277.2-201ENST00000454211 432 ntBASIC4.6□□□□□ -1.67
PRKNO60260 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PRKNO60260 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC4.6□□□□□ -1.67
PRKNO60260 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.6□□□□□ -1.67
PRKNO60260 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.6□□□□□ -1.67
PRKNO60260 AC026407.1-201ENST00000518369 204 ntBASIC4.6□□□□□ -1.67
PRKNO60260 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.6□□□□□ -1.67
PRKNO60260 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.6□□□□□ -1.67
PRKNO60260 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.6□□□□□ -1.67
PRKNO60260 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC4.6□□□□□ -1.67
PRKNO60260 BRD9P1-201ENST00000529855 560 ntBASIC4.6□□□□□ -1.67
PRKNO60260 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.6□□□□□ -1.67
PRKNO60260 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PRKNO60260 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.6□□□□□ -1.67
PRKNO60260 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.6□□□□□ -1.67
PRKNO60260 AC104229.1-201ENST00000561364 255 ntBASIC4.6□□□□□ -1.67
PRKNO60260 AC009117.1-201ENST00000563948 554 ntBASIC4.6□□□□□ -1.67
PRKNO60260 AC006116.5-201ENST00000591936 559 ntBASIC4.6□□□□□ -1.67
PRKNO60260 AC011453.2-201ENST00000603737 729 ntBASIC4.6□□□□□ -1.67
PRKNO60260 AC013244.3-201ENST00000605614 388 ntBASIC4.6□□□□□ -1.67
PRKNO60260 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.6□□□□□ -1.67
PRKNO60260 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PRKNO60260 AL022401.1-201ENST00000619498 108 ntBASIC4.6□□□□□ -1.67
PRKNO60260 AC074140.1-201ENST00000621617 208 ntBASIC4.6□□□□□ -1.67
PRKNO60260 AC068787.1-201ENST00000623908 691 ntBASIC4.6□□□□□ -1.67
PRKNO60260 AP001784.1-201ENST00000624107 428 ntBASIC4.6□□□□□ -1.67
PRKNO60260 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC4.6□□□□□ -1.67
PRKNO60260 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.6□□□□□ -1.67
PRKNO60260 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.6□□□□□ -1.67
PRKNO60260 TCP11X1-202ENST00000622971 1372 ntBASIC4.6□□□□□ -1.67
PRKNO60260 MTCO1P15-201ENST00000529569 1526 ntBASIC4.6□□□□□ -1.67
PRKNO60260 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PRKNO60260 AC011447.7-201ENST00000624228 1590 ntBASIC4.6□□□□□ -1.67
PRKNO60260 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC4.6□□□□□ -1.67
PRKNO60260 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PRKNO60260 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PRKNO60260 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PRKNO60260 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
PRKNO60260 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
PRKNO60260 Z95331.1-201ENST00000623075 23112 ntBASIC4.59□□□□□ -1.67
PRKNO60260 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
PRKNO60260 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
PRKNO60260 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
PRKNO60260 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.67
PRKNO60260 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
PRKNO60260 Z97832.1-201ENST00000402490 328 ntBASIC4.59□□□□□ -1.67
PRKNO60260 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
PRKNO60260 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.59□□□□□ -1.67
PRKNO60260 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 9.2 ms