Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
H2afb1S4R1E0 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
H2afb1S4R1E0 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
H2afb1S4R1E0 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC15.14■□□□□ 0.01
H2afb1S4R1E0 Gm15378-201ENSMUST00000121894 207 ntBASIC15.14■□□□□ 0.01
H2afb1S4R1E0 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
H2afb1S4R1E0 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
H2afb1S4R1E0 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
H2afb1S4R1E0 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
H2afb1S4R1E0 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
H2afb1S4R1E0 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
H2afb1S4R1E0 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
H2afb1S4R1E0 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
H2afb1S4R1E0 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
H2afb1S4R1E0 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
H2afb1S4R1E0 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.14■□□□□ 0.01
H2afb1S4R1E0 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
H2afb1S4R1E0 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
H2afb1S4R1E0 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
H2afb1S4R1E0 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
H2afb1S4R1E0 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
H2afb1S4R1E0 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
H2afb1S4R1E0 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
H2afb1S4R1E0 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
H2afb1S4R1E0 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC15.13■□□□□ 0.01
H2afb1S4R1E0 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
H2afb1S4R1E0 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
H2afb1S4R1E0 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
H2afb1S4R1E0 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
H2afb1S4R1E0 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
H2afb1S4R1E0 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
H2afb1S4R1E0 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
H2afb1S4R1E0 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
H2afb1S4R1E0 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
H2afb1S4R1E0 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
H2afb1S4R1E0 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
H2afb1S4R1E0 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
H2afb1S4R1E0 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
H2afb1S4R1E0 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
H2afb1S4R1E0 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
H2afb1S4R1E0 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
H2afb1S4R1E0 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
H2afb1S4R1E0 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
H2afb1S4R1E0 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
H2afb1S4R1E0 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
H2afb1S4R1E0 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
H2afb1S4R1E0 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
H2afb1S4R1E0 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC15.12■□□□□ 0.01
H2afb1S4R1E0 Gm37025-201ENSMUST00000195159 829 ntBASIC15.12■□□□□ 0.01
H2afb1S4R1E0 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
H2afb1S4R1E0 Gm44878-201ENSMUST00000205812 1295 ntBASIC15.12■□□□□ 0.01
H2afb1S4R1E0 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
H2afb1S4R1E0 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
H2afb1S4R1E0 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
H2afb1S4R1E0 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
H2afb1S4R1E0 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
H2afb1S4R1E0 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
H2afb1S4R1E0 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
H2afb1S4R1E0 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
H2afb1S4R1E0 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
H2afb1S4R1E0 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
H2afb1S4R1E0 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
H2afb1S4R1E0 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
H2afb1S4R1E0 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
H2afb1S4R1E0 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
H2afb1S4R1E0 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
H2afb1S4R1E0 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
H2afb1S4R1E0 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
H2afb1S4R1E0 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
H2afb1S4R1E0 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
H2afb1S4R1E0 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
H2afb1S4R1E0 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
H2afb1S4R1E0 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
H2afb1S4R1E0 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
H2afb1S4R1E0 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC15.11■□□□□ 0.01
H2afb1S4R1E0 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC15.11■□□□□ 0.01
H2afb1S4R1E0 CT010444.2-201ENSMUST00000217877 1629 ntBASIC15.11■□□□□ 0.01
H2afb1S4R1E0 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
H2afb1S4R1E0 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC15.11■□□□□ 0.01
H2afb1S4R1E0 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC15.11■□□□□ 0.01
H2afb1S4R1E0 AC135637.1-201ENSMUST00000227750 365 ntBASIC15.11■□□□□ 0.01
H2afb1S4R1E0 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
H2afb1S4R1E0 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
H2afb1S4R1E0 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
H2afb1S4R1E0 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.11■□□□□ 0.01
H2afb1S4R1E0 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
H2afb1S4R1E0 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
H2afb1S4R1E0 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
H2afb1S4R1E0 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
H2afb1S4R1E0 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
H2afb1S4R1E0 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
H2afb1S4R1E0 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
H2afb1S4R1E0 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
H2afb1S4R1E0 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
H2afb1S4R1E0 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
H2afb1S4R1E0 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
H2afb1S4R1E0 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
H2afb1S4R1E0 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
H2afb1S4R1E0 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
H2afb1S4R1E0 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms