Protein–RNA interactions for Protein: Q9Z2Q5

Mrpl40, 39S ribosomal protein L40, mitochondrial, mousemouse

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl40Q9Z2Q5 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Mrpl40Q9Z2Q5 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Mrpl40Q9Z2Q5 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Mrpl40Q9Z2Q5 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.68■□□□□ 0.26
Mrpl40Q9Z2Q5 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Mrpl40Q9Z2Q5 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Mrpl40Q9Z2Q5 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Mrpl40Q9Z2Q5 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Mrpl40Q9Z2Q5 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Mrpl40Q9Z2Q5 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Mrpl40Q9Z2Q5 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Mrpl40Q9Z2Q5 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Mrpl40Q9Z2Q5 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Mrpl40Q9Z2Q5 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Mrpl40Q9Z2Q5 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Mrpl40Q9Z2Q5 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Mrpl40Q9Z2Q5 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Mrpl40Q9Z2Q5 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.68■□□□□ 0.26
Mrpl40Q9Z2Q5 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Mrpl40Q9Z2Q5 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Mrpl40Q9Z2Q5 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Mrpl40Q9Z2Q5 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Mrpl40Q9Z2Q5 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Mrpl40Q9Z2Q5 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Mrpl40Q9Z2Q5 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Mrpl40Q9Z2Q5 Gm14859-201ENSMUST00000117752 357 ntBASIC16.67■□□□□ 0.26
Mrpl40Q9Z2Q5 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.67■□□□□ 0.26
Mrpl40Q9Z2Q5 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.67■□□□□ 0.26
Mrpl40Q9Z2Q5 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Mrpl40Q9Z2Q5 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Mrpl40Q9Z2Q5 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Mrpl40Q9Z2Q5 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Mrpl40Q9Z2Q5 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Mrpl40Q9Z2Q5 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Mrpl40Q9Z2Q5 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Mrpl40Q9Z2Q5 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.67■□□□□ 0.26
Mrpl40Q9Z2Q5 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.67■□□□□ 0.26
Mrpl40Q9Z2Q5 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Mrpl40Q9Z2Q5 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Mrpl40Q9Z2Q5 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Mrpl40Q9Z2Q5 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Mrpl40Q9Z2Q5 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Mrpl40Q9Z2Q5 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.66■□□□□ 0.26
Mrpl40Q9Z2Q5 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.66■□□□□ 0.26
Mrpl40Q9Z2Q5 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Mrpl40Q9Z2Q5 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.66■□□□□ 0.26
Mrpl40Q9Z2Q5 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Mrpl40Q9Z2Q5 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Mrpl40Q9Z2Q5 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Mrpl40Q9Z2Q5 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Mrpl40Q9Z2Q5 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Mrpl40Q9Z2Q5 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Mrpl40Q9Z2Q5 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Mrpl40Q9Z2Q5 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.66■□□□□ 0.26
Mrpl40Q9Z2Q5 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Mrpl40Q9Z2Q5 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Mrpl40Q9Z2Q5 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Mrpl40Q9Z2Q5 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Mrpl40Q9Z2Q5 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Mrpl40Q9Z2Q5 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Mrpl40Q9Z2Q5 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Mrpl40Q9Z2Q5 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Mrpl40Q9Z2Q5 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
Mrpl40Q9Z2Q5 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Mrpl40Q9Z2Q5 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Mrpl40Q9Z2Q5 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Mrpl40Q9Z2Q5 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Mrpl40Q9Z2Q5 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Mrpl40Q9Z2Q5 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Mrpl40Q9Z2Q5 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Mrpl40Q9Z2Q5 Gm27389-201ENSMUST00000183622 195 ntBASIC16.65■□□□□ 0.26
Mrpl40Q9Z2Q5 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Mrpl40Q9Z2Q5 Gm37025-201ENSMUST00000195159 829 ntBASIC16.65■□□□□ 0.26
Mrpl40Q9Z2Q5 Gm9731-201ENSMUST00000209480 747 ntBASIC16.65■□□□□ 0.26
Mrpl40Q9Z2Q5 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Mrpl40Q9Z2Q5 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Mrpl40Q9Z2Q5 Gm7370-201ENSMUST00000219471 767 ntBASIC16.65■□□□□ 0.26
Mrpl40Q9Z2Q5 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Mrpl40Q9Z2Q5 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Mrpl40Q9Z2Q5 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Mrpl40Q9Z2Q5 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Mrpl40Q9Z2Q5 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Mrpl40Q9Z2Q5 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Mrpl40Q9Z2Q5 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Mrpl40Q9Z2Q5 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Mrpl40Q9Z2Q5 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Mrpl40Q9Z2Q5 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Mrpl40Q9Z2Q5 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Mrpl40Q9Z2Q5 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Mrpl40Q9Z2Q5 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Mrpl40Q9Z2Q5 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Mrpl40Q9Z2Q5 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.64■□□□□ 0.25
Mrpl40Q9Z2Q5 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Mrpl40Q9Z2Q5 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Mrpl40Q9Z2Q5 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Mrpl40Q9Z2Q5 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Mrpl40Q9Z2Q5 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
Mrpl40Q9Z2Q5 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mrpl40Q9Z2Q5 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Mrpl40Q9Z2Q5 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms