Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC29.59■■■□□ 2.33
COL17A1Q9UMD9 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
COL17A1Q9UMD9 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
COL17A1Q9UMD9 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
COL17A1Q9UMD9 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
COL17A1Q9UMD9 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC29.59■■■□□ 2.33
COL17A1Q9UMD9 KRT18P31-201ENST00000506277 1292 ntBASIC29.59■■■□□ 2.33
COL17A1Q9UMD9 SLC25A1P1-201ENST00000528351 927 ntBASIC29.59■■■□□ 2.33
COL17A1Q9UMD9 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC29.59■■■□□ 2.33
COL17A1Q9UMD9 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC29.59■■■□□ 2.33
COL17A1Q9UMD9 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
COL17A1Q9UMD9 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC29.59■■■□□ 2.33
COL17A1Q9UMD9 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
COL17A1Q9UMD9 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC29.58■■■□□ 2.33
COL17A1Q9UMD9 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
COL17A1Q9UMD9 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
COL17A1Q9UMD9 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC29.58■■■□□ 2.33
COL17A1Q9UMD9 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
COL17A1Q9UMD9 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC29.58■■■□□ 2.33
COL17A1Q9UMD9 KRT16P4-201ENST00000453883 522 ntBASIC29.58■■■□□ 2.33
COL17A1Q9UMD9 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC29.58■■■□□ 2.33
COL17A1Q9UMD9 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
COL17A1Q9UMD9 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC29.58■■■□□ 2.33
COL17A1Q9UMD9 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC29.58■■■□□ 2.33
COL17A1Q9UMD9 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC29.58■■■□□ 2.33
COL17A1Q9UMD9 GOLGA2P6-201ENST00000340929 2049 ntBASIC29.57■■■□□ 2.33
COL17A1Q9UMD9 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
COL17A1Q9UMD9 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC29.57■■■□□ 2.32
COL17A1Q9UMD9 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC29.57■■■□□ 2.32
COL17A1Q9UMD9 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
COL17A1Q9UMD9 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
COL17A1Q9UMD9 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC29.57■■■□□ 2.32
COL17A1Q9UMD9 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
COL17A1Q9UMD9 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
COL17A1Q9UMD9 AL590627.1-203ENST00000421194 1026 ntBASIC29.57■■■□□ 2.32
COL17A1Q9UMD9 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC29.57■■■□□ 2.32
COL17A1Q9UMD9 RASA4DP-201ENST00000460726 1199 ntBASIC29.57■■■□□ 2.32
COL17A1Q9UMD9 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC29.57■■■□□ 2.32
COL17A1Q9UMD9 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
COL17A1Q9UMD9 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC29.57■■■□□ 2.32
COL17A1Q9UMD9 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC29.57■■■□□ 2.32
COL17A1Q9UMD9 MIR4674-201ENST00000582457 87 ntBASIC29.57■■■□□ 2.32
COL17A1Q9UMD9 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC29.57■■■□□ 2.32
COL17A1Q9UMD9 AL121912.1-201ENST00000603683 238 ntBASIC29.57■■■□□ 2.32
COL17A1Q9UMD9 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC29.57■■■□□ 2.32
COL17A1Q9UMD9 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC29.57■■■□□ 2.32
COL17A1Q9UMD9 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
COL17A1Q9UMD9 AC022898.2-201ENST00000616822 1312 ntBASIC29.57■■■□□ 2.32
COL17A1Q9UMD9 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
COL17A1Q9UMD9 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC29.57■■■□□ 2.32
COL17A1Q9UMD9 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC29.56■■■□□ 2.32
COL17A1Q9UMD9 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
COL17A1Q9UMD9 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC29.56■■■□□ 2.32
COL17A1Q9UMD9 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC29.56■■■□□ 2.32
COL17A1Q9UMD9 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC29.56■■■□□ 2.32
COL17A1Q9UMD9 AC091304.2-201ENST00000564639 760 ntBASIC29.56■■■□□ 2.32
COL17A1Q9UMD9 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
COL17A1Q9UMD9 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC29.56■■■□□ 2.32
COL17A1Q9UMD9 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC29.56■■■□□ 2.32
COL17A1Q9UMD9 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
COL17A1Q9UMD9 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
COL17A1Q9UMD9 DYM-203ENST00000442713 2147 ntTSL 2 BASIC29.56■■■□□ 2.32
COL17A1Q9UMD9 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
COL17A1Q9UMD9 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
COL17A1Q9UMD9 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC29.56■■■□□ 2.32
COL17A1Q9UMD9 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
COL17A1Q9UMD9 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
COL17A1Q9UMD9 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC29.55■■■□□ 2.32
COL17A1Q9UMD9 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC29.55■■■□□ 2.32
COL17A1Q9UMD9 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC29.55■■■□□ 2.32
COL17A1Q9UMD9 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC29.55■■■□□ 2.32
COL17A1Q9UMD9 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
COL17A1Q9UMD9 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC29.55■■■□□ 2.32
COL17A1Q9UMD9 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC29.55■■■□□ 2.32
COL17A1Q9UMD9 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
COL17A1Q9UMD9 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
COL17A1Q9UMD9 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
COL17A1Q9UMD9 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC29.55■■■□□ 2.32
COL17A1Q9UMD9 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
COL17A1Q9UMD9 PENK-208ENST00000523051 772 ntTSL 5 BASIC29.55■■■□□ 2.32
COL17A1Q9UMD9 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC29.54■■■□□ 2.32
COL17A1Q9UMD9 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
COL17A1Q9UMD9 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC29.54■■■□□ 2.32
COL17A1Q9UMD9 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
COL17A1Q9UMD9 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC29.54■■■□□ 2.32
COL17A1Q9UMD9 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
COL17A1Q9UMD9 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
COL17A1Q9UMD9 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC29.54■■■□□ 2.32
COL17A1Q9UMD9 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC29.54■■■□□ 2.32
COL17A1Q9UMD9 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC29.54■■■□□ 2.32
COL17A1Q9UMD9 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC29.54■■■□□ 2.32
COL17A1Q9UMD9 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC29.54■■■□□ 2.32
COL17A1Q9UMD9 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC29.54■■■□□ 2.32
COL17A1Q9UMD9 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
COL17A1Q9UMD9 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC29.54■■■□□ 2.32
COL17A1Q9UMD9 CHCHD2P8-201ENST00000429873 447 ntBASIC29.54■■■□□ 2.32
COL17A1Q9UMD9 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC29.54■■■□□ 2.32
COL17A1Q9UMD9 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC29.53■■■□□ 2.32
COL17A1Q9UMD9 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC29.53■■■□□ 2.32
COL17A1Q9UMD9 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms