Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC31.14■■■□□ 2.58
RIMBP3Q9UFD9 MED22-202ENST00000371999 987 ntTSL 3 BASIC31.14■■■□□ 2.58
RIMBP3Q9UFD9 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
RIMBP3Q9UFD9 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC31.14■■■□□ 2.58
RIMBP3Q9UFD9 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
RIMBP3Q9UFD9 HLA-F-220ENST00000434407 884 ntBASIC31.14■■■□□ 2.58
RIMBP3Q9UFD9 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC31.14■■■□□ 2.58
RIMBP3Q9UFD9 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC31.14■■■□□ 2.58
RIMBP3Q9UFD9 AC080038.3-201ENST00000623346 1952 ntBASIC31.14■■■□□ 2.58
RIMBP3Q9UFD9 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC31.14■■■□□ 2.58
RIMBP3Q9UFD9 AC127496.7-201ENST00000625110 1798 ntBASIC31.14■■■□□ 2.58
RIMBP3Q9UFD9 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
RIMBP3Q9UFD9 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC31.14■■■□□ 2.58
RIMBP3Q9UFD9 KRT8P17-201ENST00000453110 1448 ntBASIC31.13■■■□□ 2.57
RIMBP3Q9UFD9 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC31.13■■■□□ 2.57
RIMBP3Q9UFD9 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC31.13■■■□□ 2.57
RIMBP3Q9UFD9 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC31.13■■■□□ 2.57
RIMBP3Q9UFD9 RNF126P1-202ENST00000569893 925 ntBASIC31.13■■■□□ 2.57
RIMBP3Q9UFD9 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
RIMBP3Q9UFD9 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
RIMBP3Q9UFD9 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
RIMBP3Q9UFD9 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC31.13■■■□□ 2.57
RIMBP3Q9UFD9 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC31.13■■■□□ 2.57
RIMBP3Q9UFD9 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC31.13■■■□□ 2.57
RIMBP3Q9UFD9 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
RIMBP3Q9UFD9 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC31.13■■■□□ 2.57
RIMBP3Q9UFD9 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
RIMBP3Q9UFD9 BET1L-206ENST00000486280 665 ntTSL 3 BASIC31.13■■■□□ 2.57
RIMBP3Q9UFD9 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC31.13■■■□□ 2.57
RIMBP3Q9UFD9 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC31.12■■■□□ 2.57
RIMBP3Q9UFD9 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
RIMBP3Q9UFD9 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
RIMBP3Q9UFD9 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC31.12■■■□□ 2.57
RIMBP3Q9UFD9 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC31.12■■■□□ 2.57
RIMBP3Q9UFD9 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
RIMBP3Q9UFD9 TK1-205ENST00000590862 642 ntTSL 3 BASIC31.12■■■□□ 2.57
RIMBP3Q9UFD9 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC31.12■■■□□ 2.57
RIMBP3Q9UFD9 AC079602.3-201ENST00000623931 403 ntBASIC31.12■■■□□ 2.57
RIMBP3Q9UFD9 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC31.12■■■□□ 2.57
RIMBP3Q9UFD9 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC31.12■■■□□ 2.57
RIMBP3Q9UFD9 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC31.12■■■□□ 2.57
RIMBP3Q9UFD9 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
RIMBP3Q9UFD9 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC31.11■■■□□ 2.57
RIMBP3Q9UFD9 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
RIMBP3Q9UFD9 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
RIMBP3Q9UFD9 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC31.11■■■□□ 2.57
RIMBP3Q9UFD9 RPS8P6-201ENST00000426177 609 ntBASIC31.11■■■□□ 2.57
RIMBP3Q9UFD9 FAM197Y8-203ENST00000450145 560 ntBASIC31.11■■■□□ 2.57
RIMBP3Q9UFD9 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC31.11■■■□□ 2.57
RIMBP3Q9UFD9 RPL13AP23-201ENST00000480739 586 ntBASIC31.1■■■□□ 2.57
RIMBP3Q9UFD9 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC31.1■■■□□ 2.57
RIMBP3Q9UFD9 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC31.1■■■□□ 2.57
RIMBP3Q9UFD9 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC31.1■■■□□ 2.57
RIMBP3Q9UFD9 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
RIMBP3Q9UFD9 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC31.1■■■□□ 2.57
RIMBP3Q9UFD9 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
RIMBP3Q9UFD9 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC31.1■■■□□ 2.57
RIMBP3Q9UFD9 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
RIMBP3Q9UFD9 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
RIMBP3Q9UFD9 LSM5-204ENST00000409909 740 ntTSL 2 BASIC31.09■■■□□ 2.57
RIMBP3Q9UFD9 AC004967.1-201ENST00000453589 447 ntBASIC31.09■■■□□ 2.57
RIMBP3Q9UFD9 AC018712.1-201ENST00000455767 687 ntBASIC31.09■■■□□ 2.57
RIMBP3Q9UFD9 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
RIMBP3Q9UFD9 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
RIMBP3Q9UFD9 AC233702.3-201ENST00000578656 1387 ntBASIC31.09■■■□□ 2.57
RIMBP3Q9UFD9 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC31.09■■■□□ 2.57
RIMBP3Q9UFD9 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC31.09■■■□□ 2.57
RIMBP3Q9UFD9 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC31.09■■■□□ 2.57
RIMBP3Q9UFD9 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
RIMBP3Q9UFD9 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
RIMBP3Q9UFD9 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
RIMBP3Q9UFD9 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC31.08■■■□□ 2.57
RIMBP3Q9UFD9 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
RIMBP3Q9UFD9 ECEL1P1-201ENST00000373592 1742 ntBASIC31.08■■■□□ 2.57
RIMBP3Q9UFD9 WBP2-203ENST00000433525 928 ntTSL 2 BASIC31.08■■■□□ 2.57
RIMBP3Q9UFD9 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC31.08■■■□□ 2.57
RIMBP3Q9UFD9 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC31.08■■■□□ 2.57
RIMBP3Q9UFD9 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
RIMBP3Q9UFD9 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC31.08■■■□□ 2.57
RIMBP3Q9UFD9 RPS15-207ENST00000591032 550 ntTSL 3 BASIC31.08■■■□□ 2.57
RIMBP3Q9UFD9 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC31.08■■■□□ 2.57
RIMBP3Q9UFD9 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC31.08■■■□□ 2.57
RIMBP3Q9UFD9 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC31.08■■■□□ 2.57
RIMBP3Q9UFD9 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
RIMBP3Q9UFD9 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC31.07■■■□□ 2.56
RIMBP3Q9UFD9 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
RIMBP3Q9UFD9 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
RIMBP3Q9UFD9 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC31.07■■■□□ 2.56
RIMBP3Q9UFD9 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC31.06■■■□□ 2.56
RIMBP3Q9UFD9 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
RIMBP3Q9UFD9 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC31.06■■■□□ 2.56
RIMBP3Q9UFD9 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC31.06■■■□□ 2.56
RIMBP3Q9UFD9 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC31.06■■■□□ 2.56
RIMBP3Q9UFD9 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC31.06■■■□□ 2.56
RIMBP3Q9UFD9 AL049840.3-201ENST00000602669 611 ntBASIC31.06■■■□□ 2.56
RIMBP3Q9UFD9 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
RIMBP3Q9UFD9 GAD2-202ENST00000376248 680 ntTSL 5 BASIC31.06■■■□□ 2.56
RIMBP3Q9UFD9 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC31.06■■■□□ 2.56
RIMBP3Q9UFD9 LITAF-211ENST00000572255 516 ntTSL 4 BASIC31.06■■■□□ 2.56
RIMBP3Q9UFD9 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC31.06■■■□□ 2.56
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms