Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scn5aQ9JJV9 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scn5aQ9JJV9 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC17.18■□□□□ 0.34
Scn5aQ9JJV9 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scn5aQ9JJV9 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scn5aQ9JJV9 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Scn5aQ9JJV9 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Scn5aQ9JJV9 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC17.18■□□□□ 0.34
Scn5aQ9JJV9 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC17.18■□□□□ 0.34
Scn5aQ9JJV9 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Scn5aQ9JJV9 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC17.18■□□□□ 0.34
Scn5aQ9JJV9 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scn5aQ9JJV9 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Scn5aQ9JJV9 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Scn5aQ9JJV9 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Scn5aQ9JJV9 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Scn5aQ9JJV9 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scn5aQ9JJV9 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scn5aQ9JJV9 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scn5aQ9JJV9 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Scn5aQ9JJV9 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scn5aQ9JJV9 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scn5aQ9JJV9 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC17.17■□□□□ 0.34
Scn5aQ9JJV9 Gm4535-201ENSMUST00000182274 558 ntBASIC17.17■□□□□ 0.34
Scn5aQ9JJV9 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC17.17■□□□□ 0.34
Scn5aQ9JJV9 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scn5aQ9JJV9 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scn5aQ9JJV9 Gm10355-201ENSMUST00000097146 517 ntBASIC17.17■□□□□ 0.34
Scn5aQ9JJV9 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
Scn5aQ9JJV9 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scn5aQ9JJV9 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.17■□□□□ 0.34
Scn5aQ9JJV9 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scn5aQ9JJV9 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scn5aQ9JJV9 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scn5aQ9JJV9 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scn5aQ9JJV9 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Scn5aQ9JJV9 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scn5aQ9JJV9 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Scn5aQ9JJV9 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scn5aQ9JJV9 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Scn5aQ9JJV9 Gm8000-201ENSMUST00000188378 592 ntBASIC17.16■□□□□ 0.34
Scn5aQ9JJV9 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC17.16■□□□□ 0.34
Scn5aQ9JJV9 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC17.16■□□□□ 0.34
Scn5aQ9JJV9 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Scn5aQ9JJV9 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scn5aQ9JJV9 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scn5aQ9JJV9 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scn5aQ9JJV9 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Scn5aQ9JJV9 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.16■□□□□ 0.34
Scn5aQ9JJV9 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scn5aQ9JJV9 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scn5aQ9JJV9 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scn5aQ9JJV9 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scn5aQ9JJV9 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC17.16■□□□□ 0.34
Scn5aQ9JJV9 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC17.16■□□□□ 0.34
Scn5aQ9JJV9 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC17.16■□□□□ 0.34
Scn5aQ9JJV9 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scn5aQ9JJV9 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Scn5aQ9JJV9 Gm18856-201ENSMUST00000178096 1374 ntBASIC17.15■□□□□ 0.34
Scn5aQ9JJV9 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Scn5aQ9JJV9 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scn5aQ9JJV9 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scn5aQ9JJV9 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Scn5aQ9JJV9 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC17.15■□□□□ 0.34
Scn5aQ9JJV9 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scn5aQ9JJV9 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.15■□□□□ 0.34
Scn5aQ9JJV9 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Scn5aQ9JJV9 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scn5aQ9JJV9 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scn5aQ9JJV9 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.15■□□□□ 0.34
Scn5aQ9JJV9 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scn5aQ9JJV9 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scn5aQ9JJV9 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Scn5aQ9JJV9 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.34
Scn5aQ9JJV9 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC17.14■□□□□ 0.34
Scn5aQ9JJV9 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Scn5aQ9JJV9 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Scn5aQ9JJV9 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Scn5aQ9JJV9 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Scn5aQ9JJV9 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scn5aQ9JJV9 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scn5aQ9JJV9 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC17.14■□□□□ 0.33
Scn5aQ9JJV9 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scn5aQ9JJV9 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC17.14■□□□□ 0.33
Scn5aQ9JJV9 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC17.14■□□□□ 0.33
Scn5aQ9JJV9 Gm43575-201ENSMUST00000196420 516 ntBASIC17.14■□□□□ 0.33
Scn5aQ9JJV9 Gm43935-201ENSMUST00000203569 1050 ntBASIC17.14■□□□□ 0.33
Scn5aQ9JJV9 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scn5aQ9JJV9 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scn5aQ9JJV9 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scn5aQ9JJV9 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Scn5aQ9JJV9 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scn5aQ9JJV9 AC131586.3-201ENSMUST00000228355 1367 ntBASIC17.14■□□□□ 0.33
Scn5aQ9JJV9 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
Scn5aQ9JJV9 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Scn5aQ9JJV9 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scn5aQ9JJV9 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Scn5aQ9JJV9 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC17.13■□□□□ 0.33
Scn5aQ9JJV9 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC17.13■□□□□ 0.33
Scn5aQ9JJV9 Gm27628-201ENSMUST00000184911 107 ntBASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms