Protein–RNA interactions for Protein: Q9CWX4

Rpusd4, Mitochondrial RNA pseudouridine synthase Rpusd4, mousemouse

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpusd4Q9CWX4 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Rpusd4Q9CWX4 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Rpusd4Q9CWX4 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rpusd4Q9CWX4 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rpusd4Q9CWX4 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.15□□□□□ -0.14
Rpusd4Q9CWX4 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rpusd4Q9CWX4 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC14.15□□□□□ -0.14
Rpusd4Q9CWX4 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rpusd4Q9CWX4 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Rpusd4Q9CWX4 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rpusd4Q9CWX4 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpusd4Q9CWX4 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpusd4Q9CWX4 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpusd4Q9CWX4 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpusd4Q9CWX4 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rpusd4Q9CWX4 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpusd4Q9CWX4 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpusd4Q9CWX4 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpusd4Q9CWX4 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpusd4Q9CWX4 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpusd4Q9CWX4 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC14.14□□□□□ -0.15
Rpusd4Q9CWX4 Gm21814-202ENSMUST00000203277 873 ntBASIC14.14□□□□□ -0.15
Rpusd4Q9CWX4 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpusd4Q9CWX4 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpusd4Q9CWX4 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Rpusd4Q9CWX4 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpusd4Q9CWX4 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpusd4Q9CWX4 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC14.14□□□□□ -0.15
Rpusd4Q9CWX4 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpusd4Q9CWX4 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rpusd4Q9CWX4 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rpusd4Q9CWX4 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rpusd4Q9CWX4 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rpusd4Q9CWX4 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC14.13□□□□□ -0.15
Rpusd4Q9CWX4 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rpusd4Q9CWX4 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rpusd4Q9CWX4 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC14.13□□□□□ -0.15
Rpusd4Q9CWX4 Mir5122-201ENSMUST00000175004 89 ntBASIC14.13□□□□□ -0.15
Rpusd4Q9CWX4 Odf3b-204ENSMUST00000227834 930 ntBASIC14.13□□□□□ -0.15
Rpusd4Q9CWX4 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rpusd4Q9CWX4 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rpusd4Q9CWX4 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rpusd4Q9CWX4 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rpusd4Q9CWX4 Gm7712-202ENSMUST00000222331 1510 ntBASIC14.13□□□□□ -0.15
Rpusd4Q9CWX4 Gm9867-201ENSMUST00000192212 2647 ntBASIC14.13□□□□□ -0.15
Rpusd4Q9CWX4 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rpusd4Q9CWX4 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC14.13□□□□□ -0.15
Rpusd4Q9CWX4 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rpusd4Q9CWX4 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rpusd4Q9CWX4 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rpusd4Q9CWX4 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rpusd4Q9CWX4 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rpusd4Q9CWX4 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Rpusd4Q9CWX4 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC14.13□□□□□ -0.15
Rpusd4Q9CWX4 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC14.13□□□□□ -0.15
Rpusd4Q9CWX4 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC14.13□□□□□ -0.15
Rpusd4Q9CWX4 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rpusd4Q9CWX4 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpusd4Q9CWX4 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpusd4Q9CWX4 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rpusd4Q9CWX4 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpusd4Q9CWX4 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.12□□□□□ -0.15
Rpusd4Q9CWX4 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Rpusd4Q9CWX4 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpusd4Q9CWX4 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpusd4Q9CWX4 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpusd4Q9CWX4 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpusd4Q9CWX4 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpusd4Q9CWX4 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpusd4Q9CWX4 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Rpusd4Q9CWX4 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC14.12□□□□□ -0.15
Rpusd4Q9CWX4 Gm16042-201ENSMUST00000204813 1247 ntBASIC14.12□□□□□ -0.15
Rpusd4Q9CWX4 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpusd4Q9CWX4 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpusd4Q9CWX4 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC14.12□□□□□ -0.15
Rpusd4Q9CWX4 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpusd4Q9CWX4 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpusd4Q9CWX4 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpusd4Q9CWX4 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpusd4Q9CWX4 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpusd4Q9CWX4 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rpusd4Q9CWX4 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpusd4Q9CWX4 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpusd4Q9CWX4 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpusd4Q9CWX4 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpusd4Q9CWX4 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpusd4Q9CWX4 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpusd4Q9CWX4 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpusd4Q9CWX4 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpusd4Q9CWX4 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpusd4Q9CWX4 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rpusd4Q9CWX4 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rpusd4Q9CWX4 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rpusd4Q9CWX4 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rpusd4Q9CWX4 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rpusd4Q9CWX4 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC14.11□□□□□ -0.15
Rpusd4Q9CWX4 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rpusd4Q9CWX4 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rpusd4Q9CWX4 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rpusd4Q9CWX4 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms