Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cldnd1Q9CQX5 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cldnd1Q9CQX5 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Cldnd1Q9CQX5 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cldnd1Q9CQX5 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cldnd1Q9CQX5 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cldnd1Q9CQX5 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cldnd1Q9CQX5 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.07■□□□□ 0.32
Cldnd1Q9CQX5 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Cldnd1Q9CQX5 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC17.07■□□□□ 0.32
Cldnd1Q9CQX5 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cldnd1Q9CQX5 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cldnd1Q9CQX5 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Cldnd1Q9CQX5 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Cldnd1Q9CQX5 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC17.07■□□□□ 0.32
Cldnd1Q9CQX5 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cldnd1Q9CQX5 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cldnd1Q9CQX5 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cldnd1Q9CQX5 Gm9727-201ENSMUST00000161387 555 ntBASIC17.07■□□□□ 0.32
Cldnd1Q9CQX5 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cldnd1Q9CQX5 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cldnd1Q9CQX5 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cldnd1Q9CQX5 AC090659.1-201ENSMUST00000224334 768 ntBASIC17.07■□□□□ 0.32
Cldnd1Q9CQX5 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
Cldnd1Q9CQX5 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Cldnd1Q9CQX5 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.07■□□□□ 0.32
Cldnd1Q9CQX5 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cldnd1Q9CQX5 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cldnd1Q9CQX5 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cldnd1Q9CQX5 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cldnd1Q9CQX5 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cldnd1Q9CQX5 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cldnd1Q9CQX5 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cldnd1Q9CQX5 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cldnd1Q9CQX5 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cldnd1Q9CQX5 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
Cldnd1Q9CQX5 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.06■□□□□ 0.32
Cldnd1Q9CQX5 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cldnd1Q9CQX5 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cldnd1Q9CQX5 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cldnd1Q9CQX5 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cldnd1Q9CQX5 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Cldnd1Q9CQX5 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cldnd1Q9CQX5 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC17.06■□□□□ 0.32
Cldnd1Q9CQX5 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC17.06■□□□□ 0.32
Cldnd1Q9CQX5 Gm6550-201ENSMUST00000187574 993 ntBASIC17.06■□□□□ 0.32
Cldnd1Q9CQX5 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC17.06■□□□□ 0.32
Cldnd1Q9CQX5 Gm37584-201ENSMUST00000193595 1290 ntBASIC17.06■□□□□ 0.32
Cldnd1Q9CQX5 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC17.06■□□□□ 0.32
Cldnd1Q9CQX5 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC17.06■□□□□ 0.32
Cldnd1Q9CQX5 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Cldnd1Q9CQX5 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC17.06■□□□□ 0.32
Cldnd1Q9CQX5 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cldnd1Q9CQX5 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cldnd1Q9CQX5 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cldnd1Q9CQX5 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cldnd1Q9CQX5 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.05■□□□□ 0.32
Cldnd1Q9CQX5 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cldnd1Q9CQX5 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cldnd1Q9CQX5 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cldnd1Q9CQX5 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC17.05■□□□□ 0.32
Cldnd1Q9CQX5 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.05■□□□□ 0.32
Cldnd1Q9CQX5 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cldnd1Q9CQX5 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cldnd1Q9CQX5 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cldnd1Q9CQX5 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Cldnd1Q9CQX5 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cldnd1Q9CQX5 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cldnd1Q9CQX5 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cldnd1Q9CQX5 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cldnd1Q9CQX5 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cldnd1Q9CQX5 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Cldnd1Q9CQX5 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cldnd1Q9CQX5 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Cldnd1Q9CQX5 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Cldnd1Q9CQX5 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cldnd1Q9CQX5 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cldnd1Q9CQX5 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cldnd1Q9CQX5 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cldnd1Q9CQX5 Gm27628-201ENSMUST00000184911 107 ntBASIC17.04■□□□□ 0.32
Cldnd1Q9CQX5 AC154757.1-201ENSMUST00000228289 336 ntBASIC17.04■□□□□ 0.32
Cldnd1Q9CQX5 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cldnd1Q9CQX5 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Cldnd1Q9CQX5 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.04■□□□□ 0.32
Cldnd1Q9CQX5 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cldnd1Q9CQX5 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cldnd1Q9CQX5 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cldnd1Q9CQX5 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cldnd1Q9CQX5 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cldnd1Q9CQX5 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cldnd1Q9CQX5 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cldnd1Q9CQX5 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Cldnd1Q9CQX5 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cldnd1Q9CQX5 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cldnd1Q9CQX5 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cldnd1Q9CQX5 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Cldnd1Q9CQX5 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Cldnd1Q9CQX5 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cldnd1Q9CQX5 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.03■□□□□ 0.32
Cldnd1Q9CQX5 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms