Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Rtn4Q99P72 Gm26540-201ENSMUST00000181858 1310 ntTSL 5 BASIC21.23■□□□□ 0.99
Rtn4Q99P72 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rtn4Q99P72 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rtn4Q99P72 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Rtn4Q99P72 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Rtn4Q99P72 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rtn4Q99P72 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rtn4Q99P72 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Rtn4Q99P72 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Rtn4Q99P72 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rtn4Q99P72 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Rtn4Q99P72 Gm23958-201ENSMUST00000157207 105 ntBASIC21.22■□□□□ 0.99
Rtn4Q99P72 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rtn4Q99P72 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
Rtn4Q99P72 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rtn4Q99P72 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC21.22■□□□□ 0.99
Rtn4Q99P72 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC21.22■□□□□ 0.99
Rtn4Q99P72 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rtn4Q99P72 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rtn4Q99P72 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rtn4Q99P72 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rtn4Q99P72 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Rtn4Q99P72 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rtn4Q99P72 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC21.21■□□□□ 0.99
Rtn4Q99P72 Tbata-210ENSMUST00000151886 915 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Rtn4Q99P72 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC21.21■□□□□ 0.99
Rtn4Q99P72 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rtn4Q99P72 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC21.21■□□□□ 0.99
Rtn4Q99P72 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Rtn4Q99P72 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rtn4Q99P72 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rtn4Q99P72 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rtn4Q99P72 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Rtn4Q99P72 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC21.21■□□□□ 0.99
Rtn4Q99P72 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC21.21■□□□□ 0.99
Rtn4Q99P72 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rtn4Q99P72 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Rtn4Q99P72 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rtn4Q99P72 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rtn4Q99P72 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rtn4Q99P72 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rtn4Q99P72 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Rtn4Q99P72 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rtn4Q99P72 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rtn4Q99P72 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rtn4Q99P72 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rtn4Q99P72 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rtn4Q99P72 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rtn4Q99P72 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rtn4Q99P72 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rtn4Q99P72 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rtn4Q99P72 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
Rtn4Q99P72 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rtn4Q99P72 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC21.2■□□□□ 0.98
Rtn4Q99P72 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC21.2■□□□□ 0.98
Rtn4Q99P72 Gm18958-201ENSMUST00000174258 762 ntBASIC21.2■□□□□ 0.98
Rtn4Q99P72 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
Rtn4Q99P72 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Rtn4Q99P72 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rtn4Q99P72 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rtn4Q99P72 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rtn4Q99P72 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rtn4Q99P72 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rtn4Q99P72 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rtn4Q99P72 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rtn4Q99P72 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rtn4Q99P72 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
Rtn4Q99P72 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rtn4Q99P72 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rtn4Q99P72 Gm5898-201ENSMUST00000121016 2071 ntBASIC21.19■□□□□ 0.98
Rtn4Q99P72 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rtn4Q99P72 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rtn4Q99P72 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rtn4Q99P72 CT010478.1-201ENSMUST00000220747 2787 ntBASIC21.19■□□□□ 0.98
Rtn4Q99P72 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Rtn4Q99P72 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Rtn4Q99P72 Mir1668-201ENSMUST00000184114 107 ntBASIC21.19■□□□□ 0.98
Rtn4Q99P72 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC21.19■□□□□ 0.98
Rtn4Q99P72 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Rtn4Q99P72 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Rtn4Q99P72 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rtn4Q99P72 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rtn4Q99P72 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rtn4Q99P72 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rtn4Q99P72 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Rtn4Q99P72 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Rtn4Q99P72 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rtn4Q99P72 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Rtn4Q99P72 Gm17661-201ENSMUST00000170317 270 ntBASIC21.18■□□□□ 0.98
Rtn4Q99P72 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC21.18■□□□□ 0.98
Rtn4Q99P72 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rtn4Q99P72 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rtn4Q99P72 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rtn4Q99P72 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rtn4Q99P72 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rtn4Q99P72 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Rtn4Q99P72 Hivep3-201ENSMUST00000084306 2973 ntBASIC21.18■□□□□ 0.98
Rtn4Q99P72 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rtn4Q99P72 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms