Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Psmb5-202ENSMUST00000227257 622 ntBASIC17.59■□□□□ 0.41
Clp1Q99LI9 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clp1Q99LI9 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Clp1Q99LI9 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clp1Q99LI9 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.59■□□□□ 0.41
Clp1Q99LI9 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clp1Q99LI9 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Clp1Q99LI9 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Clp1Q99LI9 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Clp1Q99LI9 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Clp1Q99LI9 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Clp1Q99LI9 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Clp1Q99LI9 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Clp1Q99LI9 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Clp1Q99LI9 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Clp1Q99LI9 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Clp1Q99LI9 Gm4535-201ENSMUST00000182274 558 ntBASIC17.58■□□□□ 0.4
Clp1Q99LI9 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.58■□□□□ 0.4
Clp1Q99LI9 AC159093.1-201ENSMUST00000227779 380 ntBASIC17.58■□□□□ 0.4
Clp1Q99LI9 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Clp1Q99LI9 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Clp1Q99LI9 Gm10355-201ENSMUST00000097146 517 ntBASIC17.58■□□□□ 0.4
Clp1Q99LI9 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Clp1Q99LI9 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Clp1Q99LI9 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Clp1Q99LI9 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Clp1Q99LI9 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Clp1Q99LI9 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Clp1Q99LI9 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clp1Q99LI9 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clp1Q99LI9 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.57■□□□□ 0.4
Clp1Q99LI9 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Clp1Q99LI9 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Clp1Q99LI9 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
Clp1Q99LI9 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC17.57■□□□□ 0.4
Clp1Q99LI9 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clp1Q99LI9 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.57■□□□□ 0.4
Clp1Q99LI9 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC17.57■□□□□ 0.4
Clp1Q99LI9 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
Clp1Q99LI9 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clp1Q99LI9 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC17.57■□□□□ 0.4
Clp1Q99LI9 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clp1Q99LI9 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clp1Q99LI9 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clp1Q99LI9 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Clp1Q99LI9 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Clp1Q99LI9 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clp1Q99LI9 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.57■□□□□ 0.4
Clp1Q99LI9 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clp1Q99LI9 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clp1Q99LI9 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clp1Q99LI9 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clp1Q99LI9 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Clp1Q99LI9 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.56■□□□□ 0.4
Clp1Q99LI9 Gm13418-201ENSMUST00000119097 944 ntBASIC17.56■□□□□ 0.4
Clp1Q99LI9 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clp1Q99LI9 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC17.56■□□□□ 0.4
Clp1Q99LI9 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC17.56■□□□□ 0.4
Clp1Q99LI9 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC17.56■□□□□ 0.4
Clp1Q99LI9 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clp1Q99LI9 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clp1Q99LI9 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clp1Q99LI9 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clp1Q99LI9 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clp1Q99LI9 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clp1Q99LI9 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Clp1Q99LI9 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clp1Q99LI9 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Clp1Q99LI9 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clp1Q99LI9 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Clp1Q99LI9 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clp1Q99LI9 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clp1Q99LI9 Gm15467-201ENSMUST00000120582 445 ntBASIC17.55■□□□□ 0.4
Clp1Q99LI9 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clp1Q99LI9 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Clp1Q99LI9 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.55■□□□□ 0.4
Clp1Q99LI9 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Clp1Q99LI9 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clp1Q99LI9 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.55■□□□□ 0.4
Clp1Q99LI9 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clp1Q99LI9 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clp1Q99LI9 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clp1Q99LI9 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Clp1Q99LI9 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clp1Q99LI9 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clp1Q99LI9 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clp1Q99LI9 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.54■□□□□ 0.4
Clp1Q99LI9 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Clp1Q99LI9 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clp1Q99LI9 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clp1Q99LI9 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Clp1Q99LI9 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
Clp1Q99LI9 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC17.54■□□□□ 0.4
Clp1Q99LI9 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC17.54■□□□□ 0.4
Clp1Q99LI9 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC17.54■□□□□ 0.4
Clp1Q99LI9 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clp1Q99LI9 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Clp1Q99LI9 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clp1Q99LI9 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clp1Q99LI9 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms