Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Gm34391-201ENSMUST00000203706 907 ntBASIC19.67■□□□□ 0.74
Col20a1Q923P0 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Col20a1Q923P0 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Col20a1Q923P0 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Col20a1Q923P0 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Col20a1Q923P0 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col20a1Q923P0 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Col20a1Q923P0 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Col20a1Q923P0 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col20a1Q923P0 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col20a1Q923P0 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col20a1Q923P0 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col20a1Q923P0 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC19.66■□□□□ 0.74
Col20a1Q923P0 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col20a1Q923P0 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Col20a1Q923P0 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC19.66■□□□□ 0.74
Col20a1Q923P0 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC19.66■□□□□ 0.74
Col20a1Q923P0 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC19.66■□□□□ 0.74
Col20a1Q923P0 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col20a1Q923P0 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Col20a1Q923P0 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Col20a1Q923P0 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col20a1Q923P0 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC19.66■□□□□ 0.74
Col20a1Q923P0 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col20a1Q923P0 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col20a1Q923P0 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Col20a1Q923P0 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col20a1Q923P0 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col20a1Q923P0 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Col20a1Q923P0 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col20a1Q923P0 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col20a1Q923P0 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col20a1Q923P0 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Col20a1Q923P0 Rprl3-201ENSMUST00000157400 290 ntBASIC19.65■□□□□ 0.74
Col20a1Q923P0 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col20a1Q923P0 AC153794.1-201ENSMUST00000169148 126 ntBASIC19.65■□□□□ 0.74
Col20a1Q923P0 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
Col20a1Q923P0 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Col20a1Q923P0 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col20a1Q923P0 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC19.65■□□□□ 0.74
Col20a1Q923P0 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col20a1Q923P0 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col20a1Q923P0 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Col20a1Q923P0 Birc2-201ENSMUST00000054878 378 ntBASIC19.65■□□□□ 0.74
Col20a1Q923P0 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Col20a1Q923P0 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col20a1Q923P0 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col20a1Q923P0 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
Col20a1Q923P0 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col20a1Q923P0 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
Col20a1Q923P0 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC19.64■□□□□ 0.74
Col20a1Q923P0 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Col20a1Q923P0 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Col20a1Q923P0 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col20a1Q923P0 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
Col20a1Q923P0 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Col20a1Q923P0 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col20a1Q923P0 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col20a1Q923P0 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC19.64■□□□□ 0.73
Col20a1Q923P0 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Col20a1Q923P0 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col20a1Q923P0 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col20a1Q923P0 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col20a1Q923P0 Gm15442-201ENSMUST00000117905 1527 ntBASIC19.64■□□□□ 0.73
Col20a1Q923P0 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col20a1Q923P0 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col20a1Q923P0 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Col20a1Q923P0 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC19.63■□□□□ 0.73
Col20a1Q923P0 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC19.63■□□□□ 0.73
Col20a1Q923P0 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC19.63■□□□□ 0.73
Col20a1Q923P0 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC19.63■□□□□ 0.73
Col20a1Q923P0 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col20a1Q923P0 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col20a1Q923P0 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Col20a1Q923P0 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Col20a1Q923P0 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Col20a1Q923P0 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Col20a1Q923P0 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Col20a1Q923P0 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Col20a1Q923P0 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC19.62■□□□□ 0.73
Col20a1Q923P0 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Col20a1Q923P0 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col20a1Q923P0 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Col20a1Q923P0 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Col20a1Q923P0 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col20a1Q923P0 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col20a1Q923P0 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Col20a1Q923P0 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col20a1Q923P0 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Col20a1Q923P0 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col20a1Q923P0 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col20a1Q923P0 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col20a1Q923P0 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col20a1Q923P0 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col20a1Q923P0 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col20a1Q923P0 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col20a1Q923P0 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Col20a1Q923P0 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC19.61■□□□□ 0.73
Col20a1Q923P0 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Col20a1Q923P0 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms