Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb4Q91XZ6 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb4Q91XZ6 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Pcdhb4Q91XZ6 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.56■□□□□ 0.24
Pcdhb4Q91XZ6 Gm38027-201ENSMUST00000192315 235 ntBASIC16.56■□□□□ 0.24
Pcdhb4Q91XZ6 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.56■□□□□ 0.24
Pcdhb4Q91XZ6 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb4Q91XZ6 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Pcdhb4Q91XZ6 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb4Q91XZ6 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb4Q91XZ6 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb4Q91XZ6 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Pcdhb4Q91XZ6 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb4Q91XZ6 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb4Q91XZ6 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb4Q91XZ6 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.56■□□□□ 0.24
Pcdhb4Q91XZ6 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Pcdhb4Q91XZ6 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb4Q91XZ6 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb4Q91XZ6 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb4Q91XZ6 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb4Q91XZ6 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb4Q91XZ6 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb4Q91XZ6 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb4Q91XZ6 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb4Q91XZ6 Gm7638-201ENSMUST00000121348 967 ntBASIC16.55■□□□□ 0.24
Pcdhb4Q91XZ6 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb4Q91XZ6 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC16.55■□□□□ 0.24
Pcdhb4Q91XZ6 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb4Q91XZ6 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb4Q91XZ6 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb4Q91XZ6 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb4Q91XZ6 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb4Q91XZ6 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb4Q91XZ6 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
Pcdhb4Q91XZ6 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb4Q91XZ6 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb4Q91XZ6 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb4Q91XZ6 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb4Q91XZ6 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb4Q91XZ6 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Pcdhb4Q91XZ6 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb4Q91XZ6 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Pcdhb4Q91XZ6 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.54■□□□□ 0.24
Pcdhb4Q91XZ6 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb4Q91XZ6 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb4Q91XZ6 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb4Q91XZ6 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb4Q91XZ6 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb4Q91XZ6 Gm9731-201ENSMUST00000209480 747 ntBASIC16.54■□□□□ 0.24
Pcdhb4Q91XZ6 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb4Q91XZ6 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb4Q91XZ6 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Pcdhb4Q91XZ6 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Pcdhb4Q91XZ6 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb4Q91XZ6 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.54■□□□□ 0.24
Pcdhb4Q91XZ6 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
Pcdhb4Q91XZ6 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb4Q91XZ6 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb4Q91XZ6 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.53■□□□□ 0.24
Pcdhb4Q91XZ6 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb4Q91XZ6 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb4Q91XZ6 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb4Q91XZ6 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb4Q91XZ6 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
Pcdhb4Q91XZ6 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC16.53■□□□□ 0.24
Pcdhb4Q91XZ6 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb4Q91XZ6 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.53■□□□□ 0.24
Pcdhb4Q91XZ6 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb4Q91XZ6 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb4Q91XZ6 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb4Q91XZ6 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb4Q91XZ6 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb4Q91XZ6 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb4Q91XZ6 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb4Q91XZ6 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb4Q91XZ6 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb4Q91XZ6 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Pcdhb4Q91XZ6 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC16.53■□□□□ 0.24
Pcdhb4Q91XZ6 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb4Q91XZ6 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb4Q91XZ6 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb4Q91XZ6 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.52■□□□□ 0.24
Pcdhb4Q91XZ6 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Pcdhb4Q91XZ6 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb4Q91XZ6 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb4Q91XZ6 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb4Q91XZ6 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.52■□□□□ 0.24
Pcdhb4Q91XZ6 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb4Q91XZ6 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Pcdhb4Q91XZ6 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.52■□□□□ 0.24
Pcdhb4Q91XZ6 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.52■□□□□ 0.24
Pcdhb4Q91XZ6 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.52■□□□□ 0.24
Pcdhb4Q91XZ6 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb4Q91XZ6 Timm23-208ENSMUST00000226683 750 ntBASIC16.52■□□□□ 0.24
Pcdhb4Q91XZ6 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Pcdhb4Q91XZ6 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Pcdhb4Q91XZ6 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb4Q91XZ6 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb4Q91XZ6 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms