Protein–RNA interactions for Protein: Q8VHP8

Rab40b, Ras-related protein Rab-40B, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40bQ8VHP8 Gm24841-201ENSMUST00000158676 357 ntBASIC15.04■□□□□ -0
Rab40bQ8VHP8 Gm8495-201ENSMUST00000188740 694 ntBASIC15.04■□□□□ -0
Rab40bQ8VHP8 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Rab40bQ8VHP8 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rab40bQ8VHP8 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rab40bQ8VHP8 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC15.04■□□□□ -0
Rab40bQ8VHP8 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rab40bQ8VHP8 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Rab40bQ8VHP8 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rab40bQ8VHP8 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rab40bQ8VHP8 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rab40bQ8VHP8 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rab40bQ8VHP8 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Rab40bQ8VHP8 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Rab40bQ8VHP8 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rab40bQ8VHP8 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Rab40bQ8VHP8 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rab40bQ8VHP8 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rab40bQ8VHP8 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rab40bQ8VHP8 Gm21596-201ENSMUST00000178049 1316 ntBASIC15.03■□□□□ -0
Rab40bQ8VHP8 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rab40bQ8VHP8 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rab40bQ8VHP8 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rab40bQ8VHP8 Gm17661-201ENSMUST00000170317 270 ntBASIC15.03■□□□□ -0
Rab40bQ8VHP8 Gm18025-201ENSMUST00000221733 862 ntBASIC15.03■□□□□ -0
Rab40bQ8VHP8 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rab40bQ8VHP8 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.03■□□□□ -0
Rab40bQ8VHP8 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rab40bQ8VHP8 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC15.03■□□□□ -0
Rab40bQ8VHP8 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rab40bQ8VHP8 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rab40bQ8VHP8 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rab40bQ8VHP8 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC15.03■□□□□ -0
Rab40bQ8VHP8 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rab40bQ8VHP8 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rab40bQ8VHP8 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rab40bQ8VHP8 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Rab40bQ8VHP8 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rab40bQ8VHP8 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC15.02■□□□□ -0
Rab40bQ8VHP8 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC15.02■□□□□ -0
Rab40bQ8VHP8 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC15.02■□□□□ -0
Rab40bQ8VHP8 Gm42569-201ENSMUST00000200539 472 ntBASIC15.02■□□□□ -0
Rab40bQ8VHP8 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rab40bQ8VHP8 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
Rab40bQ8VHP8 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rab40bQ8VHP8 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Rab40bQ8VHP8 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Rab40bQ8VHP8 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rab40bQ8VHP8 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rab40bQ8VHP8 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Rab40bQ8VHP8 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rab40bQ8VHP8 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Rab40bQ8VHP8 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rab40bQ8VHP8 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rab40bQ8VHP8 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Rab40bQ8VHP8 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Rab40bQ8VHP8 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Rab40bQ8VHP8 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Rab40bQ8VHP8 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rab40bQ8VHP8 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rab40bQ8VHP8 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rab40bQ8VHP8 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rab40bQ8VHP8 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rab40bQ8VHP8 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC15.01□□□□□ -0.01
Rab40bQ8VHP8 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rab40bQ8VHP8 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rab40bQ8VHP8 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rab40bQ8VHP8 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Rab40bQ8VHP8 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC15.01□□□□□ -0.01
Rab40bQ8VHP8 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC15.01□□□□□ -0.01
Rab40bQ8VHP8 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.01□□□□□ -0.01
Rab40bQ8VHP8 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rab40bQ8VHP8 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rab40bQ8VHP8 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rab40bQ8VHP8 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rab40bQ8VHP8 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Rab40bQ8VHP8 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rab40bQ8VHP8 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.01□□□□□ -0.01
Rab40bQ8VHP8 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rab40bQ8VHP8 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rab40bQ8VHP8 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rab40bQ8VHP8 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rab40bQ8VHP8 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rab40bQ8VHP8 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Rab40bQ8VHP8 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15□□□□□ -0.01
Rab40bQ8VHP8 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rab40bQ8VHP8 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Rab40bQ8VHP8 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Rab40bQ8VHP8 Gm37025-201ENSMUST00000195159 829 ntBASIC15□□□□□ -0.01
Rab40bQ8VHP8 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Rab40bQ8VHP8 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rab40bQ8VHP8 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC15□□□□□ -0.01
Rab40bQ8VHP8 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC15□□□□□ -0.01
Rab40bQ8VHP8 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
Rab40bQ8VHP8 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rab40bQ8VHP8 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Rab40bQ8VHP8 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rab40bQ8VHP8 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rab40bQ8VHP8 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rab40bQ8VHP8 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms