Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rpap2Q8VC34 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Rpap2Q8VC34 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rpap2Q8VC34 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rpap2Q8VC34 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rpap2Q8VC34 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rpap2Q8VC34 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.31■□□□□ 0.52
Rpap2Q8VC34 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC18.31■□□□□ 0.52
Rpap2Q8VC34 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rpap2Q8VC34 Gm18101-201ENSMUST00000215769 548 ntBASIC18.31■□□□□ 0.52
Rpap2Q8VC34 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Rpap2Q8VC34 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rpap2Q8VC34 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rpap2Q8VC34 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC18.31■□□□□ 0.52
Rpap2Q8VC34 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rpap2Q8VC34 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rpap2Q8VC34 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rpap2Q8VC34 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rpap2Q8VC34 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rpap2Q8VC34 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rpap2Q8VC34 Haglr-201ENSMUST00000100000 2085 ntBASIC18.3■□□□□ 0.52
Rpap2Q8VC34 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rpap2Q8VC34 Zfp264-201ENSMUST00000208656 1563 ntBASIC18.3■□□□□ 0.52
Rpap2Q8VC34 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rpap2Q8VC34 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Rpap2Q8VC34 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rpap2Q8VC34 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rpap2Q8VC34 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC18.3■□□□□ 0.52
Rpap2Q8VC34 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC18.3■□□□□ 0.52
Rpap2Q8VC34 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rpap2Q8VC34 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rpap2Q8VC34 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rpap2Q8VC34 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Rpap2Q8VC34 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rpap2Q8VC34 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rpap2Q8VC34 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rpap2Q8VC34 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rpap2Q8VC34 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Rpap2Q8VC34 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rpap2Q8VC34 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rpap2Q8VC34 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rpap2Q8VC34 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rpap2Q8VC34 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rpap2Q8VC34 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rpap2Q8VC34 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rpap2Q8VC34 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Rpap2Q8VC34 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rpap2Q8VC34 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rpap2Q8VC34 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.29■□□□□ 0.52
Rpap2Q8VC34 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rpap2Q8VC34 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC18.29■□□□□ 0.52
Rpap2Q8VC34 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rpap2Q8VC34 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC18.29■□□□□ 0.52
Rpap2Q8VC34 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rpap2Q8VC34 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rpap2Q8VC34 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rpap2Q8VC34 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC18.28■□□□□ 0.52
Rpap2Q8VC34 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rpap2Q8VC34 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rpap2Q8VC34 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rpap2Q8VC34 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rpap2Q8VC34 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rpap2Q8VC34 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rpap2Q8VC34 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
Rpap2Q8VC34 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
Rpap2Q8VC34 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rpap2Q8VC34 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rpap2Q8VC34 AC122351.1-201ENSMUST00000220467 126 ntBASIC18.28■□□□□ 0.52
Rpap2Q8VC34 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rpap2Q8VC34 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rpap2Q8VC34 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rpap2Q8VC34 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rpap2Q8VC34 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rpap2Q8VC34 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Rpap2Q8VC34 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rpap2Q8VC34 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rpap2Q8VC34 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rpap2Q8VC34 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rpap2Q8VC34 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rpap2Q8VC34 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rpap2Q8VC34 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rpap2Q8VC34 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rpap2Q8VC34 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC18.27■□□□□ 0.52
Rpap2Q8VC34 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rpap2Q8VC34 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rpap2Q8VC34 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rpap2Q8VC34 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rpap2Q8VC34 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rpap2Q8VC34 Mir7071-201ENSMUST00000184847 69 ntBASIC18.27■□□□□ 0.52
Rpap2Q8VC34 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Rpap2Q8VC34 Gm18421-201ENSMUST00000204122 625 ntBASIC18.27■□□□□ 0.52
Rpap2Q8VC34 AC121577.1-201ENSMUST00000227302 707 ntBASIC18.27■□□□□ 0.52
Rpap2Q8VC34 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Rpap2Q8VC34 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rpap2Q8VC34 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rpap2Q8VC34 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC18.27■□□□□ 0.51
Rpap2Q8VC34 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rpap2Q8VC34 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC18.27■□□□□ 0.51
Rpap2Q8VC34 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rpap2Q8VC34 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms