Protein–RNA interactions for Protein: Q8R4P5

Tmc1, Transmembrane channel-like protein 1, mousemouse

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmc1Q8R4P5 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tmc1Q8R4P5 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC20.43■□□□□ 0.86
Tmc1Q8R4P5 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tmc1Q8R4P5 Gm16011-201ENSMUST00000121567 2662 ntBASIC20.43■□□□□ 0.86
Tmc1Q8R4P5 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tmc1Q8R4P5 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tmc1Q8R4P5 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tmc1Q8R4P5 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Tmc1Q8R4P5 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tmc1Q8R4P5 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tmc1Q8R4P5 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tmc1Q8R4P5 Gm13836-201ENSMUST00000121159 501 ntBASIC20.43■□□□□ 0.86
Tmc1Q8R4P5 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Tmc1Q8R4P5 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Tmc1Q8R4P5 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Tmc1Q8R4P5 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tmc1Q8R4P5 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Tmc1Q8R4P5 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tmc1Q8R4P5 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Tmc1Q8R4P5 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC20.43■□□□□ 0.86
Tmc1Q8R4P5 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tmc1Q8R4P5 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tmc1Q8R4P5 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tmc1Q8R4P5 AC153526.5-201ENSMUST00000218661 2147 ntBASIC20.42■□□□□ 0.86
Tmc1Q8R4P5 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Tmc1Q8R4P5 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tmc1Q8R4P5 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Tmc1Q8R4P5 Krtap5-1-202ENSMUST00000188274 742 ntBASIC20.42■□□□□ 0.86
Tmc1Q8R4P5 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Tmc1Q8R4P5 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Tmc1Q8R4P5 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Tmc1Q8R4P5 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tmc1Q8R4P5 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Tmc1Q8R4P5 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tmc1Q8R4P5 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Tmc1Q8R4P5 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tmc1Q8R4P5 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tmc1Q8R4P5 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tmc1Q8R4P5 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tmc1Q8R4P5 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tmc1Q8R4P5 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tmc1Q8R4P5 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Tmc1Q8R4P5 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tmc1Q8R4P5 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tmc1Q8R4P5 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Tmc1Q8R4P5 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tmc1Q8R4P5 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Tmc1Q8R4P5 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tmc1Q8R4P5 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC20.41■□□□□ 0.86
Tmc1Q8R4P5 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Tmc1Q8R4P5 Gm37055-201ENSMUST00000191866 133 ntBASIC20.41■□□□□ 0.86
Tmc1Q8R4P5 AC135963.1-201ENSMUST00000211640 717 ntBASIC20.41■□□□□ 0.86
Tmc1Q8R4P5 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC20.41■□□□□ 0.86
Tmc1Q8R4P5 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Tmc1Q8R4P5 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tmc1Q8R4P5 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tmc1Q8R4P5 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tmc1Q8R4P5 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tmc1Q8R4P5 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tmc1Q8R4P5 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Tmc1Q8R4P5 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tmc1Q8R4P5 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tmc1Q8R4P5 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tmc1Q8R4P5 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tmc1Q8R4P5 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tmc1Q8R4P5 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC20.4■□□□□ 0.86
Tmc1Q8R4P5 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Tmc1Q8R4P5 Gm4974-201ENSMUST00000209974 875 ntBASIC20.4■□□□□ 0.86
Tmc1Q8R4P5 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tmc1Q8R4P5 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tmc1Q8R4P5 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tmc1Q8R4P5 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tmc1Q8R4P5 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tmc1Q8R4P5 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Tmc1Q8R4P5 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Tmc1Q8R4P5 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Tmc1Q8R4P5 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Tmc1Q8R4P5 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Tmc1Q8R4P5 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Tmc1Q8R4P5 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Tmc1Q8R4P5 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Tmc1Q8R4P5 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Tmc1Q8R4P5 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Tmc1Q8R4P5 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tmc1Q8R4P5 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Tmc1Q8R4P5 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tmc1Q8R4P5 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Tmc1Q8R4P5 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC20.39■□□□□ 0.85
Tmc1Q8R4P5 Gm17661-201ENSMUST00000170317 270 ntBASIC20.39■□□□□ 0.85
Tmc1Q8R4P5 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
Tmc1Q8R4P5 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tmc1Q8R4P5 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Tmc1Q8R4P5 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tmc1Q8R4P5 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tmc1Q8R4P5 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tmc1Q8R4P5 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC20.39■□□□□ 0.85
Tmc1Q8R4P5 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tmc1Q8R4P5 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tmc1Q8R4P5 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.85
Tmc1Q8R4P5 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms