Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sf3a1Q8K4Z5 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sf3a1Q8K4Z5 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sf3a1Q8K4Z5 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Sf3a1Q8K4Z5 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sf3a1Q8K4Z5 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC20.41■□□□□ 0.86
Sf3a1Q8K4Z5 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sf3a1Q8K4Z5 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sf3a1Q8K4Z5 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Sf3a1Q8K4Z5 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sf3a1Q8K4Z5 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC20.41■□□□□ 0.86
Sf3a1Q8K4Z5 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sf3a1Q8K4Z5 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Sf3a1Q8K4Z5 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Sf3a1Q8K4Z5 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sf3a1Q8K4Z5 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sf3a1Q8K4Z5 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC20.41■□□□□ 0.86
Sf3a1Q8K4Z5 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sf3a1Q8K4Z5 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Sf3a1Q8K4Z5 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sf3a1Q8K4Z5 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sf3a1Q8K4Z5 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sf3a1Q8K4Z5 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Sf3a1Q8K4Z5 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Sf3a1Q8K4Z5 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Sf3a1Q8K4Z5 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC20.4■□□□□ 0.86
Sf3a1Q8K4Z5 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sf3a1Q8K4Z5 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sf3a1Q8K4Z5 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Sf3a1Q8K4Z5 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sf3a1Q8K4Z5 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Sf3a1Q8K4Z5 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sf3a1Q8K4Z5 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sf3a1Q8K4Z5 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC20.4■□□□□ 0.86
Sf3a1Q8K4Z5 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sf3a1Q8K4Z5 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Sf3a1Q8K4Z5 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC20.39■□□□□ 0.86
Sf3a1Q8K4Z5 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Sf3a1Q8K4Z5 Gm45244-201ENSMUST00000211328 2200 ntBASIC20.39■□□□□ 0.86
Sf3a1Q8K4Z5 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Sf3a1Q8K4Z5 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Sf3a1Q8K4Z5 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
Sf3a1Q8K4Z5 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sf3a1Q8K4Z5 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sf3a1Q8K4Z5 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sf3a1Q8K4Z5 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sf3a1Q8K4Z5 Gm6659-201ENSMUST00000174752 547 ntBASIC20.39■□□□□ 0.85
Sf3a1Q8K4Z5 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC20.39■□□□□ 0.85
Sf3a1Q8K4Z5 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sf3a1Q8K4Z5 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC20.39■□□□□ 0.85
Sf3a1Q8K4Z5 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sf3a1Q8K4Z5 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sf3a1Q8K4Z5 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sf3a1Q8K4Z5 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sf3a1Q8K4Z5 Gm45203-201ENSMUST00000206384 1831 ntBASIC20.39■□□□□ 0.85
Sf3a1Q8K4Z5 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sf3a1Q8K4Z5 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Sf3a1Q8K4Z5 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sf3a1Q8K4Z5 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC20.38■□□□□ 0.85
Sf3a1Q8K4Z5 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sf3a1Q8K4Z5 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sf3a1Q8K4Z5 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sf3a1Q8K4Z5 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Sf3a1Q8K4Z5 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC20.38■□□□□ 0.85
Sf3a1Q8K4Z5 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Sf3a1Q8K4Z5 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC20.38■□□□□ 0.85
Sf3a1Q8K4Z5 Gm18115-201ENSMUST00000221209 621 ntBASIC20.38■□□□□ 0.85
Sf3a1Q8K4Z5 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Sf3a1Q8K4Z5 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sf3a1Q8K4Z5 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sf3a1Q8K4Z5 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sf3a1Q8K4Z5 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Sf3a1Q8K4Z5 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Sf3a1Q8K4Z5 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Sf3a1Q8K4Z5 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Sf3a1Q8K4Z5 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sf3a1Q8K4Z5 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Sf3a1Q8K4Z5 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sf3a1Q8K4Z5 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
Sf3a1Q8K4Z5 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC20.37■□□□□ 0.85
Sf3a1Q8K4Z5 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Sf3a1Q8K4Z5 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sf3a1Q8K4Z5 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sf3a1Q8K4Z5 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Sf3a1Q8K4Z5 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Sf3a1Q8K4Z5 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Sf3a1Q8K4Z5 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Sf3a1Q8K4Z5 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Sf3a1Q8K4Z5 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC20.37■□□□□ 0.85
Sf3a1Q8K4Z5 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Sf3a1Q8K4Z5 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sf3a1Q8K4Z5 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sf3a1Q8K4Z5 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Sf3a1Q8K4Z5 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Sf3a1Q8K4Z5 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Sf3a1Q8K4Z5 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Sf3a1Q8K4Z5 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sf3a1Q8K4Z5 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Sf3a1Q8K4Z5 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sf3a1Q8K4Z5 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms