Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Cystm1Q8K353 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cystm1Q8K353 Gm44291-201ENSMUST00000203102 2865 ntBASIC10.51□□□□□ -0.73
Cystm1Q8K353 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cystm1Q8K353 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cystm1Q8K353 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cystm1Q8K353 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Cystm1Q8K353 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cystm1Q8K353 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cystm1Q8K353 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cystm1Q8K353 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cystm1Q8K353 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cystm1Q8K353 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cystm1Q8K353 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Cystm1Q8K353 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cystm1Q8K353 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cystm1Q8K353 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cystm1Q8K353 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cystm1Q8K353 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cystm1Q8K353 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cystm1Q8K353 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cystm1Q8K353 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC10.5□□□□□ -0.73
Cystm1Q8K353 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cystm1Q8K353 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Cystm1Q8K353 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cystm1Q8K353 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cystm1Q8K353 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cystm1Q8K353 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC10.5□□□□□ -0.73
Cystm1Q8K353 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cystm1Q8K353 Gm20049-201ENSMUST00000219950 730 ntBASIC10.5□□□□□ -0.73
Cystm1Q8K353 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC10.5□□□□□ -0.73
Cystm1Q8K353 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cystm1Q8K353 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cystm1Q8K353 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cystm1Q8K353 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cystm1Q8K353 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC10.5□□□□□ -0.73
Cystm1Q8K353 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cystm1Q8K353 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cystm1Q8K353 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
Cystm1Q8K353 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cystm1Q8K353 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Cystm1Q8K353 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cystm1Q8K353 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Cystm1Q8K353 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cystm1Q8K353 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cystm1Q8K353 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cystm1Q8K353 Gm44544-201ENSMUST00000207052 1844 ntBASIC10.49□□□□□ -0.73
Cystm1Q8K353 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cystm1Q8K353 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cystm1Q8K353 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Cystm1Q8K353 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cystm1Q8K353 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cystm1Q8K353 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Cystm1Q8K353 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cystm1Q8K353 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cystm1Q8K353 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cystm1Q8K353 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cystm1Q8K353 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cystm1Q8K353 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cystm1Q8K353 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Cystm1Q8K353 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cystm1Q8K353 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Cystm1Q8K353 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cystm1Q8K353 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cystm1Q8K353 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Cystm1Q8K353 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC10.49□□□□□ -0.73
Cystm1Q8K353 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Cystm1Q8K353 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cystm1Q8K353 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cystm1Q8K353 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cystm1Q8K353 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cystm1Q8K353 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Cystm1Q8K353 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cystm1Q8K353 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cystm1Q8K353 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Cystm1Q8K353 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cystm1Q8K353 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC10.49□□□□□ -0.73
Cystm1Q8K353 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cystm1Q8K353 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Cystm1Q8K353 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cystm1Q8K353 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Cystm1Q8K353 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC10.49□□□□□ -0.73
Cystm1Q8K353 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Cystm1Q8K353 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cystm1Q8K353 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC10.49□□□□□ -0.73
Cystm1Q8K353 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cystm1Q8K353 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cystm1Q8K353 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cystm1Q8K353 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cystm1Q8K353 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cystm1Q8K353 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cystm1Q8K353 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cystm1Q8K353 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC10.48□□□□□ -0.73
Cystm1Q8K353 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cystm1Q8K353 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cystm1Q8K353 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cystm1Q8K353 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cystm1Q8K353 AC159649.2-201ENSMUST00000222984 3223 ntBASIC10.48□□□□□ -0.73
Cystm1Q8K353 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Cystm1Q8K353 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms