Protein–RNA interactions for Protein: Q8CIG0

Depdc1a, DEP domain-containing protein 1A, mousemouse

Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1aQ8CIG0 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Depdc1aQ8CIG0 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC18.76■□□□□ 0.59
Depdc1aQ8CIG0 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.76■□□□□ 0.59
Depdc1aQ8CIG0 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Depdc1aQ8CIG0 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Depdc1aQ8CIG0 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Depdc1aQ8CIG0 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Depdc1aQ8CIG0 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Depdc1aQ8CIG0 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
Depdc1aQ8CIG0 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Depdc1aQ8CIG0 Gm7153-201ENSMUST00000117092 455 ntBASIC18.75■□□□□ 0.59
Depdc1aQ8CIG0 Gm13312-201ENSMUST00000119631 718 ntBASIC18.75■□□□□ 0.59
Depdc1aQ8CIG0 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Depdc1aQ8CIG0 AC153794.1-201ENSMUST00000169148 126 ntBASIC18.75■□□□□ 0.59
Depdc1aQ8CIG0 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC18.75■□□□□ 0.59
Depdc1aQ8CIG0 Gm34391-201ENSMUST00000203706 907 ntBASIC18.75■□□□□ 0.59
Depdc1aQ8CIG0 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Depdc1aQ8CIG0 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Depdc1aQ8CIG0 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Depdc1aQ8CIG0 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Depdc1aQ8CIG0 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Depdc1aQ8CIG0 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Depdc1aQ8CIG0 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Depdc1aQ8CIG0 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Depdc1aQ8CIG0 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Depdc1aQ8CIG0 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Depdc1aQ8CIG0 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Depdc1aQ8CIG0 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Depdc1aQ8CIG0 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Depdc1aQ8CIG0 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Depdc1aQ8CIG0 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Depdc1aQ8CIG0 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Depdc1aQ8CIG0 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Depdc1aQ8CIG0 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Depdc1aQ8CIG0 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Depdc1aQ8CIG0 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Depdc1aQ8CIG0 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Depdc1aQ8CIG0 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Depdc1aQ8CIG0 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Depdc1aQ8CIG0 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Depdc1aQ8CIG0 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Depdc1aQ8CIG0 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Depdc1aQ8CIG0 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Depdc1aQ8CIG0 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Depdc1aQ8CIG0 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Depdc1aQ8CIG0 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Depdc1aQ8CIG0 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Depdc1aQ8CIG0 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Depdc1aQ8CIG0 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Depdc1aQ8CIG0 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Depdc1aQ8CIG0 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Depdc1aQ8CIG0 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Depdc1aQ8CIG0 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Depdc1aQ8CIG0 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Depdc1aQ8CIG0 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Depdc1aQ8CIG0 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Depdc1aQ8CIG0 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Depdc1aQ8CIG0 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Depdc1aQ8CIG0 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Depdc1aQ8CIG0 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Depdc1aQ8CIG0 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Depdc1aQ8CIG0 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Depdc1aQ8CIG0 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Depdc1aQ8CIG0 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Depdc1aQ8CIG0 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Depdc1aQ8CIG0 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Depdc1aQ8CIG0 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Depdc1aQ8CIG0 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Depdc1aQ8CIG0 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Depdc1aQ8CIG0 Gm24589-201ENSMUST00000116692 94 ntBASIC18.72■□□□□ 0.59
Depdc1aQ8CIG0 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Depdc1aQ8CIG0 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Depdc1aQ8CIG0 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Depdc1aQ8CIG0 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Depdc1aQ8CIG0 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC18.72■□□□□ 0.59
Depdc1aQ8CIG0 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Depdc1aQ8CIG0 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Depdc1aQ8CIG0 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Depdc1aQ8CIG0 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Depdc1aQ8CIG0 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC18.71■□□□□ 0.59
Depdc1aQ8CIG0 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Depdc1aQ8CIG0 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Depdc1aQ8CIG0 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Depdc1aQ8CIG0 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Depdc1aQ8CIG0 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Depdc1aQ8CIG0 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Depdc1aQ8CIG0 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Depdc1aQ8CIG0 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
Depdc1aQ8CIG0 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Depdc1aQ8CIG0 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Depdc1aQ8CIG0 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Depdc1aQ8CIG0 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Depdc1aQ8CIG0 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Depdc1aQ8CIG0 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.7■□□□□ 0.58
Depdc1aQ8CIG0 Gm15372-201ENSMUST00000120729 834 ntBASIC18.7■□□□□ 0.58
Depdc1aQ8CIG0 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Depdc1aQ8CIG0 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
Depdc1aQ8CIG0 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC18.7■□□□□ 0.58
Depdc1aQ8CIG0 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Depdc1aQ8CIG0 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms