Protein–RNA interactions for Protein: Q8CDW1

Fam228a, Protein FAM228A, mousemouse

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam228aQ8CDW1 Gm10517-202ENSMUST00000192970 758 ntBASIC17.57■□□□□ 0.4
Fam228aQ8CDW1 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Fam228aQ8CDW1 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC17.57■□□□□ 0.4
Fam228aQ8CDW1 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Fam228aQ8CDW1 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
Fam228aQ8CDW1 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.57■□□□□ 0.4
Fam228aQ8CDW1 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Fam228aQ8CDW1 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.57■□□□□ 0.4
Fam228aQ8CDW1 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Fam228aQ8CDW1 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Fam228aQ8CDW1 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Fam228aQ8CDW1 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Fam228aQ8CDW1 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Fam228aQ8CDW1 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Fam228aQ8CDW1 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
Fam228aQ8CDW1 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Fam228aQ8CDW1 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Fam228aQ8CDW1 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Fam228aQ8CDW1 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Fam228aQ8CDW1 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Fam228aQ8CDW1 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.56■□□□□ 0.4
Fam228aQ8CDW1 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Fam228aQ8CDW1 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Fam228aQ8CDW1 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Fam228aQ8CDW1 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Fam228aQ8CDW1 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Fam228aQ8CDW1 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Fam228aQ8CDW1 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Fam228aQ8CDW1 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Fam228aQ8CDW1 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Fam228aQ8CDW1 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Fam228aQ8CDW1 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Fam228aQ8CDW1 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Fam228aQ8CDW1 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.55■□□□□ 0.4
Fam228aQ8CDW1 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Fam228aQ8CDW1 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Fam228aQ8CDW1 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Fam228aQ8CDW1 Gm37292-201ENSMUST00000192062 758 ntBASIC17.55■□□□□ 0.4
Fam228aQ8CDW1 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Fam228aQ8CDW1 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Fam228aQ8CDW1 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Fam228aQ8CDW1 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Fam228aQ8CDW1 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Fam228aQ8CDW1 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Fam228aQ8CDW1 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Fam228aQ8CDW1 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Fam228aQ8CDW1 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Fam228aQ8CDW1 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.55■□□□□ 0.4
Fam228aQ8CDW1 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Fam228aQ8CDW1 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Fam228aQ8CDW1 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Fam228aQ8CDW1 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Fam228aQ8CDW1 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.54■□□□□ 0.4
Fam228aQ8CDW1 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Fam228aQ8CDW1 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Fam228aQ8CDW1 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.54■□□□□ 0.4
Fam228aQ8CDW1 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Fam228aQ8CDW1 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.54■□□□□ 0.4
Fam228aQ8CDW1 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.54■□□□□ 0.4
Fam228aQ8CDW1 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Fam228aQ8CDW1 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Fam228aQ8CDW1 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Fam228aQ8CDW1 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Fam228aQ8CDW1 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Fam228aQ8CDW1 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Fam228aQ8CDW1 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.54■□□□□ 0.4
Fam228aQ8CDW1 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Fam228aQ8CDW1 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Fam228aQ8CDW1 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Fam228aQ8CDW1 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Fam228aQ8CDW1 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Fam228aQ8CDW1 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Fam228aQ8CDW1 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Fam228aQ8CDW1 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Fam228aQ8CDW1 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC17.53■□□□□ 0.4
Fam228aQ8CDW1 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Fam228aQ8CDW1 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Fam228aQ8CDW1 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Fam228aQ8CDW1 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Fam228aQ8CDW1 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.53■□□□□ 0.4
Fam228aQ8CDW1 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.53■□□□□ 0.4
Fam228aQ8CDW1 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Fam228aQ8CDW1 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Fam228aQ8CDW1 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Fam228aQ8CDW1 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Fam228aQ8CDW1 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Fam228aQ8CDW1 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Fam228aQ8CDW1 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC17.53■□□□□ 0.4
Fam228aQ8CDW1 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Fam228aQ8CDW1 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Fam228aQ8CDW1 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Fam228aQ8CDW1 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Fam228aQ8CDW1 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Fam228aQ8CDW1 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Fam228aQ8CDW1 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC17.52■□□□□ 0.4
Fam228aQ8CDW1 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Fam228aQ8CDW1 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Fam228aQ8CDW1 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
Fam228aQ8CDW1 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Fam228aQ8CDW1 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms