Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cpsf4Q8BQZ5 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cpsf4Q8BQZ5 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Cpsf4Q8BQZ5 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Cpsf4Q8BQZ5 Gm13836-201ENSMUST00000121159 501 ntBASIC16.2■□□□□ 0.18
Cpsf4Q8BQZ5 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cpsf4Q8BQZ5 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cpsf4Q8BQZ5 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cpsf4Q8BQZ5 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
Cpsf4Q8BQZ5 Gm7889-201ENSMUST00000185591 958 ntBASIC16.2■□□□□ 0.18
Cpsf4Q8BQZ5 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.2■□□□□ 0.18
Cpsf4Q8BQZ5 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cpsf4Q8BQZ5 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cpsf4Q8BQZ5 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cpsf4Q8BQZ5 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Cpsf4Q8BQZ5 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cpsf4Q8BQZ5 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cpsf4Q8BQZ5 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cpsf4Q8BQZ5 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Cpsf4Q8BQZ5 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cpsf4Q8BQZ5 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cpsf4Q8BQZ5 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cpsf4Q8BQZ5 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cpsf4Q8BQZ5 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.19■□□□□ 0.18
Cpsf4Q8BQZ5 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Cpsf4Q8BQZ5 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Cpsf4Q8BQZ5 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cpsf4Q8BQZ5 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cpsf4Q8BQZ5 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cpsf4Q8BQZ5 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cpsf4Q8BQZ5 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cpsf4Q8BQZ5 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cpsf4Q8BQZ5 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cpsf4Q8BQZ5 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cpsf4Q8BQZ5 Gm7638-201ENSMUST00000121348 967 ntBASIC16.19■□□□□ 0.18
Cpsf4Q8BQZ5 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.19■□□□□ 0.18
Cpsf4Q8BQZ5 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Cpsf4Q8BQZ5 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cpsf4Q8BQZ5 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cpsf4Q8BQZ5 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cpsf4Q8BQZ5 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
Cpsf4Q8BQZ5 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cpsf4Q8BQZ5 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cpsf4Q8BQZ5 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Cpsf4Q8BQZ5 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cpsf4Q8BQZ5 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Cpsf4Q8BQZ5 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cpsf4Q8BQZ5 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.18■□□□□ 0.18
Cpsf4Q8BQZ5 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.18■□□□□ 0.18
Cpsf4Q8BQZ5 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cpsf4Q8BQZ5 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cpsf4Q8BQZ5 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.18■□□□□ 0.18
Cpsf4Q8BQZ5 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.18■□□□□ 0.18
Cpsf4Q8BQZ5 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cpsf4Q8BQZ5 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cpsf4Q8BQZ5 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.18■□□□□ 0.18
Cpsf4Q8BQZ5 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.18■□□□□ 0.18
Cpsf4Q8BQZ5 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cpsf4Q8BQZ5 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.18■□□□□ 0.18
Cpsf4Q8BQZ5 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC16.18■□□□□ 0.18
Cpsf4Q8BQZ5 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cpsf4Q8BQZ5 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cpsf4Q8BQZ5 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.18■□□□□ 0.18
Cpsf4Q8BQZ5 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Cpsf4Q8BQZ5 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.18■□□□□ 0.18
Cpsf4Q8BQZ5 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cpsf4Q8BQZ5 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.18■□□□□ 0.18
Cpsf4Q8BQZ5 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cpsf4Q8BQZ5 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cpsf4Q8BQZ5 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cpsf4Q8BQZ5 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
Cpsf4Q8BQZ5 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cpsf4Q8BQZ5 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.17■□□□□ 0.18
Cpsf4Q8BQZ5 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.17■□□□□ 0.18
Cpsf4Q8BQZ5 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cpsf4Q8BQZ5 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cpsf4Q8BQZ5 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cpsf4Q8BQZ5 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Cpsf4Q8BQZ5 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cpsf4Q8BQZ5 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.17■□□□□ 0.18
Cpsf4Q8BQZ5 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cpsf4Q8BQZ5 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cpsf4Q8BQZ5 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cpsf4Q8BQZ5 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cpsf4Q8BQZ5 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.17■□□□□ 0.18
Cpsf4Q8BQZ5 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cpsf4Q8BQZ5 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cpsf4Q8BQZ5 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cpsf4Q8BQZ5 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.17■□□□□ 0.18
Cpsf4Q8BQZ5 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cpsf4Q8BQZ5 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.17■□□□□ 0.18
Cpsf4Q8BQZ5 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cpsf4Q8BQZ5 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cpsf4Q8BQZ5 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cpsf4Q8BQZ5 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cpsf4Q8BQZ5 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cpsf4Q8BQZ5 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cpsf4Q8BQZ5 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.16■□□□□ 0.18
Cpsf4Q8BQZ5 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cpsf4Q8BQZ5 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms