Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Col16a1Q8BLX7 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Col16a1Q8BLX7 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Col16a1Q8BLX7 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Col16a1Q8BLX7 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Col16a1Q8BLX7 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC21.86■■□□□ 1.09
Col16a1Q8BLX7 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Col16a1Q8BLX7 Gm36967-201ENSMUST00000193814 266 ntBASIC21.86■■□□□ 1.09
Col16a1Q8BLX7 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Col16a1Q8BLX7 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Col16a1Q8BLX7 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Col16a1Q8BLX7 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Col16a1Q8BLX7 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Col16a1Q8BLX7 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Col16a1Q8BLX7 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Col16a1Q8BLX7 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Col16a1Q8BLX7 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Col16a1Q8BLX7 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC21.85■■□□□ 1.09
Col16a1Q8BLX7 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Col16a1Q8BLX7 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Col16a1Q8BLX7 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Col16a1Q8BLX7 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Col16a1Q8BLX7 AC122901.1-201ENSMUST00000214203 1790 ntBASIC21.85■■□□□ 1.09
Col16a1Q8BLX7 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Col16a1Q8BLX7 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Col16a1Q8BLX7 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Col16a1Q8BLX7 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Col16a1Q8BLX7 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
Col16a1Q8BLX7 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Col16a1Q8BLX7 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Col16a1Q8BLX7 Gm4459-201ENSMUST00000118750 468 ntBASIC21.84■■□□□ 1.09
Col16a1Q8BLX7 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
Col16a1Q8BLX7 Auts2-212ENSMUST00000178555 309 ntBASIC21.84■■□□□ 1.09
Col16a1Q8BLX7 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC21.84■■□□□ 1.09
Col16a1Q8BLX7 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Col16a1Q8BLX7 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Col16a1Q8BLX7 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC21.84■■□□□ 1.09
Col16a1Q8BLX7 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Col16a1Q8BLX7 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Col16a1Q8BLX7 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Col16a1Q8BLX7 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Col16a1Q8BLX7 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC21.84■■□□□ 1.09
Col16a1Q8BLX7 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Col16a1Q8BLX7 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Col16a1Q8BLX7 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Col16a1Q8BLX7 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Col16a1Q8BLX7 Gm7063-201ENSMUST00000186840 981 ntBASIC21.83■■□□□ 1.09
Col16a1Q8BLX7 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
Col16a1Q8BLX7 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Col16a1Q8BLX7 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Col16a1Q8BLX7 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.83■■□□□ 1.08
Col16a1Q8BLX7 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
Col16a1Q8BLX7 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Col16a1Q8BLX7 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC21.82■■□□□ 1.08
Col16a1Q8BLX7 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Col16a1Q8BLX7 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Col16a1Q8BLX7 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC21.82■■□□□ 1.08
Col16a1Q8BLX7 AC154757.1-201ENSMUST00000228289 336 ntBASIC21.82■■□□□ 1.08
Col16a1Q8BLX7 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Col16a1Q8BLX7 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Col16a1Q8BLX7 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Col16a1Q8BLX7 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC21.82■■□□□ 1.08
Col16a1Q8BLX7 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Col16a1Q8BLX7 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Col16a1Q8BLX7 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Col16a1Q8BLX7 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Col16a1Q8BLX7 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC21.82■■□□□ 1.08
Col16a1Q8BLX7 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC21.82■■□□□ 1.08
Col16a1Q8BLX7 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC21.82■■□□□ 1.08
Col16a1Q8BLX7 Gm25406-201ENSMUST00000157599 105 ntBASIC21.82■■□□□ 1.08
Col16a1Q8BLX7 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Col16a1Q8BLX7 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC21.82■■□□□ 1.08
Col16a1Q8BLX7 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Col16a1Q8BLX7 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC21.82■■□□□ 1.08
Col16a1Q8BLX7 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Col16a1Q8BLX7 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Col16a1Q8BLX7 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Col16a1Q8BLX7 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Col16a1Q8BLX7 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Col16a1Q8BLX7 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Col16a1Q8BLX7 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC21.81■■□□□ 1.08
Col16a1Q8BLX7 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Col16a1Q8BLX7 Gm45683-201ENSMUST00000210825 1247 ntBASIC21.81■■□□□ 1.08
Col16a1Q8BLX7 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Col16a1Q8BLX7 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Col16a1Q8BLX7 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Col16a1Q8BLX7 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Col16a1Q8BLX7 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Col16a1Q8BLX7 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC21.8■■□□□ 1.08
Col16a1Q8BLX7 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Col16a1Q8BLX7 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Col16a1Q8BLX7 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Col16a1Q8BLX7 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Col16a1Q8BLX7 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Col16a1Q8BLX7 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Col16a1Q8BLX7 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Col16a1Q8BLX7 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Col16a1Q8BLX7 Gm6184-201ENSMUST00000120403 1261 ntBASIC21.79■■□□□ 1.08
Col16a1Q8BLX7 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Col16a1Q8BLX7 AC090659.1-201ENSMUST00000224334 768 ntBASIC21.79■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms