Protein–RNA interactions for Protein: Q8BFY6

Pef1, Peflin, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pef1Q8BFY6 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Pef1Q8BFY6 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pef1Q8BFY6 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC13.2□□□□□ -0.3
Pef1Q8BFY6 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Pef1Q8BFY6 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pef1Q8BFY6 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pef1Q8BFY6 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC13.2□□□□□ -0.3
Pef1Q8BFY6 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pef1Q8BFY6 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pef1Q8BFY6 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pef1Q8BFY6 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pef1Q8BFY6 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pef1Q8BFY6 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pef1Q8BFY6 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pef1Q8BFY6 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pef1Q8BFY6 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pef1Q8BFY6 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Pef1Q8BFY6 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pef1Q8BFY6 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pef1Q8BFY6 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pef1Q8BFY6 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
Pef1Q8BFY6 AC099934.2-201ENSMUST00000196389 70 ntBASIC13.19□□□□□ -0.3
Pef1Q8BFY6 AC156953.1-201ENSMUST00000196953 70 ntBASIC13.19□□□□□ -0.3
Pef1Q8BFY6 AC157822.2-201ENSMUST00000200291 70 ntBASIC13.19□□□□□ -0.3
Pef1Q8BFY6 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC13.19□□□□□ -0.3
Pef1Q8BFY6 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pef1Q8BFY6 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Pef1Q8BFY6 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Pef1Q8BFY6 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pef1Q8BFY6 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pef1Q8BFY6 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pef1Q8BFY6 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pef1Q8BFY6 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pef1Q8BFY6 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pef1Q8BFY6 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pef1Q8BFY6 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Pef1Q8BFY6 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pef1Q8BFY6 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
Pef1Q8BFY6 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Pef1Q8BFY6 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pef1Q8BFY6 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pef1Q8BFY6 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pef1Q8BFY6 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pef1Q8BFY6 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pef1Q8BFY6 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pef1Q8BFY6 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pef1Q8BFY6 Gm19430-201ENSMUST00000193847 2137 ntBASIC13.18□□□□□ -0.3
Pef1Q8BFY6 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Pef1Q8BFY6 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pef1Q8BFY6 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pef1Q8BFY6 Gm10654-201ENSMUST00000098653 1633 ntBASIC13.18□□□□□ -0.3
Pef1Q8BFY6 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pef1Q8BFY6 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pef1Q8BFY6 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC13.18□□□□□ -0.3
Pef1Q8BFY6 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC13.18□□□□□ -0.3
Pef1Q8BFY6 Mir6349-201ENSMUST00000184059 97 ntBASIC13.18□□□□□ -0.3
Pef1Q8BFY6 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC13.18□□□□□ -0.3
Pef1Q8BFY6 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pef1Q8BFY6 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pef1Q8BFY6 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pef1Q8BFY6 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC13.18□□□□□ -0.3
Pef1Q8BFY6 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pef1Q8BFY6 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pef1Q8BFY6 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Pef1Q8BFY6 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pef1Q8BFY6 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pef1Q8BFY6 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pef1Q8BFY6 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pef1Q8BFY6 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Pef1Q8BFY6 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC13.18□□□□□ -0.3
Pef1Q8BFY6 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC13.18□□□□□ -0.3
Pef1Q8BFY6 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC13.18□□□□□ -0.3
Pef1Q8BFY6 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pef1Q8BFY6 AC093043.3-201ENSMUST00000226531 2273 ntBASIC13.18□□□□□ -0.3
Pef1Q8BFY6 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pef1Q8BFY6 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC13.17□□□□□ -0.3
Pef1Q8BFY6 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pef1Q8BFY6 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pef1Q8BFY6 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Pef1Q8BFY6 AL590614.2-201ENSMUST00000225374 1937 ntBASIC13.17□□□□□ -0.3
Pef1Q8BFY6 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pef1Q8BFY6 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC13.17□□□□□ -0.3
Pef1Q8BFY6 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pef1Q8BFY6 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pef1Q8BFY6 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pef1Q8BFY6 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Pef1Q8BFY6 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pef1Q8BFY6 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pef1Q8BFY6 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Pef1Q8BFY6 Gm6576-201ENSMUST00000169678 883 ntBASIC13.17□□□□□ -0.3
Pef1Q8BFY6 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pef1Q8BFY6 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC13.17□□□□□ -0.3
Pef1Q8BFY6 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pef1Q8BFY6 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pef1Q8BFY6 Gm6365-201ENSMUST00000054711 744 ntBASIC13.17□□□□□ -0.3
Pef1Q8BFY6 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pef1Q8BFY6 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pef1Q8BFY6 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pef1Q8BFY6 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pef1Q8BFY6 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms