Protein–RNA interactions for Protein: Q6PE54

Dhx40, Probable ATP-dependent RNA helicase DHX40, mousemouse

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dhx40Q6PE54 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Dhx40Q6PE54 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Dhx40Q6PE54 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Dhx40Q6PE54 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Dhx40Q6PE54 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Dhx40Q6PE54 Gm19430-201ENSMUST00000193847 2137 ntBASIC18.55■□□□□ 0.56
Dhx40Q6PE54 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Dhx40Q6PE54 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Dhx40Q6PE54 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Dhx40Q6PE54 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.55■□□□□ 0.56
Dhx40Q6PE54 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.55■□□□□ 0.56
Dhx40Q6PE54 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Dhx40Q6PE54 Gm18666-201ENSMUST00000190039 958 ntBASIC18.55■□□□□ 0.56
Dhx40Q6PE54 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Dhx40Q6PE54 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Dhx40Q6PE54 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Dhx40Q6PE54 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Dhx40Q6PE54 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Dhx40Q6PE54 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Dhx40Q6PE54 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.55■□□□□ 0.56
Dhx40Q6PE54 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Dhx40Q6PE54 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Dhx40Q6PE54 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Dhx40Q6PE54 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Dhx40Q6PE54 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Dhx40Q6PE54 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Dhx40Q6PE54 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Dhx40Q6PE54 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Dhx40Q6PE54 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC18.54■□□□□ 0.56
Dhx40Q6PE54 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Dhx40Q6PE54 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Dhx40Q6PE54 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Dhx40Q6PE54 Gm16011-201ENSMUST00000121567 2662 ntBASIC18.54■□□□□ 0.56
Dhx40Q6PE54 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Dhx40Q6PE54 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC18.54■□□□□ 0.56
Dhx40Q6PE54 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.54■□□□□ 0.56
Dhx40Q6PE54 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Dhx40Q6PE54 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.54■□□□□ 0.56
Dhx40Q6PE54 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Dhx40Q6PE54 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Dhx40Q6PE54 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Dhx40Q6PE54 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Dhx40Q6PE54 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Dhx40Q6PE54 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Dhx40Q6PE54 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Dhx40Q6PE54 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Dhx40Q6PE54 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Dhx40Q6PE54 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Dhx40Q6PE54 AC115863.1-201ENSMUST00000214815 1813 ntBASIC18.53■□□□□ 0.56
Dhx40Q6PE54 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Dhx40Q6PE54 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Dhx40Q6PE54 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Dhx40Q6PE54 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC18.53■□□□□ 0.56
Dhx40Q6PE54 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Dhx40Q6PE54 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Dhx40Q6PE54 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.53■□□□□ 0.56
Dhx40Q6PE54 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Dhx40Q6PE54 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Dhx40Q6PE54 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Dhx40Q6PE54 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Dhx40Q6PE54 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Dhx40Q6PE54 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Dhx40Q6PE54 Wnt10b-204ENSMUST00000226655 1807 ntBASIC18.53■□□□□ 0.56
Dhx40Q6PE54 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Dhx40Q6PE54 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Dhx40Q6PE54 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Dhx40Q6PE54 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Dhx40Q6PE54 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Dhx40Q6PE54 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Dhx40Q6PE54 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Dhx40Q6PE54 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Dhx40Q6PE54 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Dhx40Q6PE54 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Dhx40Q6PE54 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Dhx40Q6PE54 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.52■□□□□ 0.56
Dhx40Q6PE54 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Dhx40Q6PE54 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Dhx40Q6PE54 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Dhx40Q6PE54 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Dhx40Q6PE54 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Dhx40Q6PE54 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Dhx40Q6PE54 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Dhx40Q6PE54 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Dhx40Q6PE54 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Dhx40Q6PE54 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Dhx40Q6PE54 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Dhx40Q6PE54 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Dhx40Q6PE54 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Dhx40Q6PE54 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Dhx40Q6PE54 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Dhx40Q6PE54 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Dhx40Q6PE54 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC18.51■□□□□ 0.55
Dhx40Q6PE54 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Dhx40Q6PE54 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.51■□□□□ 0.55
Dhx40Q6PE54 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Dhx40Q6PE54 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Dhx40Q6PE54 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Dhx40Q6PE54 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Dhx40Q6PE54 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Dhx40Q6PE54 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms