Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sdf4Q61112 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.92■□□□□ 0.3
Sdf4Q61112 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sdf4Q61112 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sdf4Q61112 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sdf4Q61112 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sdf4Q61112 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sdf4Q61112 Mir1668-201ENSMUST00000184114 107 ntBASIC16.92■□□□□ 0.3
Sdf4Q61112 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.92■□□□□ 0.3
Sdf4Q61112 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Sdf4Q61112 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Sdf4Q61112 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sdf4Q61112 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sdf4Q61112 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Sdf4Q61112 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sdf4Q61112 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sdf4Q61112 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sdf4Q61112 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sdf4Q61112 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Sdf4Q61112 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sdf4Q61112 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Sdf4Q61112 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Sdf4Q61112 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sdf4Q61112 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.91■□□□□ 0.3
Sdf4Q61112 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.91■□□□□ 0.3
Sdf4Q61112 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.91■□□□□ 0.3
Sdf4Q61112 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Sdf4Q61112 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sdf4Q61112 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sdf4Q61112 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sdf4Q61112 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sdf4Q61112 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sdf4Q61112 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Sdf4Q61112 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sdf4Q61112 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sdf4Q61112 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Sdf4Q61112 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.9■□□□□ 0.3
Sdf4Q61112 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sdf4Q61112 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sdf4Q61112 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sdf4Q61112 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Sdf4Q61112 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.9■□□□□ 0.3
Sdf4Q61112 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Sdf4Q61112 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.9■□□□□ 0.3
Sdf4Q61112 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Sdf4Q61112 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sdf4Q61112 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sdf4Q61112 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.9■□□□□ 0.3
Sdf4Q61112 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Sdf4Q61112 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sdf4Q61112 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sdf4Q61112 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Sdf4Q61112 Actl10-202ENSMUST00000226583 1501 ntBASIC16.9■□□□□ 0.3
Sdf4Q61112 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Sdf4Q61112 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sdf4Q61112 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Sdf4Q61112 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sdf4Q61112 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Sdf4Q61112 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
Sdf4Q61112 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
Sdf4Q61112 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sdf4Q61112 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sdf4Q61112 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sdf4Q61112 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Sdf4Q61112 Gm13186-201ENSMUST00000118031 316 ntBASIC16.89■□□□□ 0.29
Sdf4Q61112 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.89■□□□□ 0.29
Sdf4Q61112 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Sdf4Q61112 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Sdf4Q61112 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sdf4Q61112 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Sdf4Q61112 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sdf4Q61112 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sdf4Q61112 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sdf4Q61112 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sdf4Q61112 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sdf4Q61112 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sdf4Q61112 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sdf4Q61112 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.89■□□□□ 0.29
Sdf4Q61112 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sdf4Q61112 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sdf4Q61112 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sdf4Q61112 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sdf4Q61112 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Sdf4Q61112 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Sdf4Q61112 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.88■□□□□ 0.29
Sdf4Q61112 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Sdf4Q61112 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.88■□□□□ 0.29
Sdf4Q61112 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Sdf4Q61112 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.88■□□□□ 0.29
Sdf4Q61112 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Sdf4Q61112 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.88■□□□□ 0.29
Sdf4Q61112 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sdf4Q61112 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Sdf4Q61112 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sdf4Q61112 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sdf4Q61112 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Sdf4Q61112 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sdf4Q61112 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sdf4Q61112 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sdf4Q61112 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms