Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav3-3Q5R1C3 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav3-3Q5R1C3 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav3-3Q5R1C3 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav3-3Q5R1C3 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC12.58□□□□□ -0.4
Trav3-3Q5R1C3 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav3-3Q5R1C3 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC12.58□□□□□ -0.4
Trav3-3Q5R1C3 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav3-3Q5R1C3 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav3-3Q5R1C3 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav3-3Q5R1C3 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav3-3Q5R1C3 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Trav3-3Q5R1C3 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav3-3Q5R1C3 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav3-3Q5R1C3 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav3-3Q5R1C3 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav3-3Q5R1C3 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav3-3Q5R1C3 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC12.58□□□□□ -0.4
Trav3-3Q5R1C3 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav3-3Q5R1C3 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav3-3Q5R1C3 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav3-3Q5R1C3 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav3-3Q5R1C3 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav3-3Q5R1C3 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav3-3Q5R1C3 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav3-3Q5R1C3 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav3-3Q5R1C3 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC12.57□□□□□ -0.4
Trav3-3Q5R1C3 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav3-3Q5R1C3 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav3-3Q5R1C3 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav3-3Q5R1C3 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC12.57□□□□□ -0.4
Trav3-3Q5R1C3 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav3-3Q5R1C3 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Trav3-3Q5R1C3 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC12.57□□□□□ -0.4
Trav3-3Q5R1C3 Gm40848-201ENSMUST00000221998 324 ntBASIC12.57□□□□□ -0.4
Trav3-3Q5R1C3 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC12.57□□□□□ -0.4
Trav3-3Q5R1C3 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav3-3Q5R1C3 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav3-3Q5R1C3 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trav3-3Q5R1C3 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav3-3Q5R1C3 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trav3-3Q5R1C3 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC12.57□□□□□ -0.4
Trav3-3Q5R1C3 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav3-3Q5R1C3 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
Trav3-3Q5R1C3 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC12.57□□□□□ -0.4
Trav3-3Q5R1C3 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Trav3-3Q5R1C3 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav3-3Q5R1C3 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav3-3Q5R1C3 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav3-3Q5R1C3 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Trav3-3Q5R1C3 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Trav3-3Q5R1C3 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav3-3Q5R1C3 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav3-3Q5R1C3 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav3-3Q5R1C3 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav3-3Q5R1C3 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav3-3Q5R1C3 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav3-3Q5R1C3 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC12.56□□□□□ -0.4
Trav3-3Q5R1C3 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav3-3Q5R1C3 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC12.56□□□□□ -0.4
Trav3-3Q5R1C3 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Trav3-3Q5R1C3 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav3-3Q5R1C3 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav3-3Q5R1C3 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trav3-3Q5R1C3 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav3-3Q5R1C3 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav3-3Q5R1C3 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav3-3Q5R1C3 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav3-3Q5R1C3 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav3-3Q5R1C3 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav3-3Q5R1C3 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav3-3Q5R1C3 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trav3-3Q5R1C3 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav3-3Q5R1C3 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav3-3Q5R1C3 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav3-3Q5R1C3 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav3-3Q5R1C3 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav3-3Q5R1C3 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav3-3Q5R1C3 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trav3-3Q5R1C3 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav3-3Q5R1C3 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC12.55□□□□□ -0.4
Trav3-3Q5R1C3 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav3-3Q5R1C3 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav3-3Q5R1C3 Gm43017-201ENSMUST00000198296 752 ntBASIC12.55□□□□□ -0.4
Trav3-3Q5R1C3 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav3-3Q5R1C3 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC12.55□□□□□ -0.4
Trav3-3Q5R1C3 Gm45417-201ENSMUST00000209533 758 ntBASIC12.55□□□□□ -0.4
Trav3-3Q5R1C3 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav3-3Q5R1C3 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav3-3Q5R1C3 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav3-3Q5R1C3 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav3-3Q5R1C3 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav3-3Q5R1C3 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav3-3Q5R1C3 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trav3-3Q5R1C3 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav3-3Q5R1C3 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav3-3Q5R1C3 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav3-3Q5R1C3 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav3-3Q5R1C3 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav3-3Q5R1C3 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms