Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Urb1Q571H0 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Urb1Q571H0 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Urb1Q571H0 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Urb1Q571H0 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Urb1Q571H0 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
Urb1Q571H0 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Urb1Q571H0 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Urb1Q571H0 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Urb1Q571H0 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Urb1Q571H0 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Urb1Q571H0 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Urb1Q571H0 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Urb1Q571H0 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC15.3■□□□□ 0.04
Urb1Q571H0 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC15.3■□□□□ 0.04
Urb1Q571H0 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Urb1Q571H0 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Urb1Q571H0 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Urb1Q571H0 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Urb1Q571H0 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Urb1Q571H0 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Urb1Q571H0 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Urb1Q571H0 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Urb1Q571H0 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Urb1Q571H0 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC15.3■□□□□ 0.04
Urb1Q571H0 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Urb1Q571H0 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Urb1Q571H0 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Urb1Q571H0 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC15.29■□□□□ 0.04
Urb1Q571H0 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC15.29■□□□□ 0.04
Urb1Q571H0 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC15.29■□□□□ 0.04
Urb1Q571H0 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC15.29■□□□□ 0.04
Urb1Q571H0 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Urb1Q571H0 Wnt10b-204ENSMUST00000226655 1807 ntBASIC15.29■□□□□ 0.04
Urb1Q571H0 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Urb1Q571H0 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Urb1Q571H0 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Urb1Q571H0 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Urb1Q571H0 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Urb1Q571H0 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Urb1Q571H0 Dmtn-207ENSMUST00000228001 2437 ntBASIC15.29■□□□□ 0.04
Urb1Q571H0 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC15.29■□□□□ 0.04
Urb1Q571H0 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC15.29■□□□□ 0.04
Urb1Q571H0 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Urb1Q571H0 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC15.29■□□□□ 0.04
Urb1Q571H0 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Urb1Q571H0 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Urb1Q571H0 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC15.29■□□□□ 0.04
Urb1Q571H0 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Urb1Q571H0 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Urb1Q571H0 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Urb1Q571H0 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Urb1Q571H0 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Urb1Q571H0 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Urb1Q571H0 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Urb1Q571H0 Gm27000-201ENSMUST00000182943 842 ntBASIC15.28■□□□□ 0.04
Urb1Q571H0 Gm10060-201ENSMUST00000212002 111 ntBASIC15.28■□□□□ 0.04
Urb1Q571H0 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Urb1Q571H0 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Urb1Q571H0 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Urb1Q571H0 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Urb1Q571H0 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Urb1Q571H0 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Urb1Q571H0 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Urb1Q571H0 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Urb1Q571H0 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Urb1Q571H0 Gm11779-201ENSMUST00000118541 368 ntBASIC15.28■□□□□ 0.04
Urb1Q571H0 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC15.28■□□□□ 0.04
Urb1Q571H0 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Urb1Q571H0 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC15.28■□□□□ 0.04
Urb1Q571H0 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Urb1Q571H0 Gm10616-201ENSMUST00000205285 2127 ntBASIC15.28■□□□□ 0.04
Urb1Q571H0 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Urb1Q571H0 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Urb1Q571H0 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Urb1Q571H0 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Urb1Q571H0 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Urb1Q571H0 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Urb1Q571H0 Gm4995-201ENSMUST00000117247 432 ntBASIC15.27■□□□□ 0.04
Urb1Q571H0 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Urb1Q571H0 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC15.27■□□□□ 0.04
Urb1Q571H0 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Urb1Q571H0 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Urb1Q571H0 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Urb1Q571H0 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Urb1Q571H0 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Urb1Q571H0 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Urb1Q571H0 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Urb1Q571H0 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Urb1Q571H0 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
Urb1Q571H0 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Urb1Q571H0 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Urb1Q571H0 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Urb1Q571H0 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Urb1Q571H0 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Urb1Q571H0 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Urb1Q571H0 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Urb1Q571H0 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Urb1Q571H0 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Urb1Q571H0 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 9.6 ms