Protein–RNA interactions for Protein: Q3UW12

Cnga4, Cyclic nucleotide-gated cation channel alpha-4, mousemouse

Predictions only

Length 575 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnga4Q3UW12 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cnga4Q3UW12 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cnga4Q3UW12 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cnga4Q3UW12 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Cnga4Q3UW12 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cnga4Q3UW12 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cnga4Q3UW12 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cnga4Q3UW12 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cnga4Q3UW12 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.98■□□□□ 0.31
Cnga4Q3UW12 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cnga4Q3UW12 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cnga4Q3UW12 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Cnga4Q3UW12 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Cnga4Q3UW12 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cnga4Q3UW12 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.98■□□□□ 0.31
Cnga4Q3UW12 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Cnga4Q3UW12 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Cnga4Q3UW12 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC16.98■□□□□ 0.31
Cnga4Q3UW12 Gm15375-201ENSMUST00000119510 849 ntBASIC16.98■□□□□ 0.31
Cnga4Q3UW12 Rab3c-203ENSMUST00000224180 967 ntBASIC16.98■□□□□ 0.31
Cnga4Q3UW12 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cnga4Q3UW12 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Cnga4Q3UW12 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cnga4Q3UW12 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cnga4Q3UW12 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.98■□□□□ 0.31
Cnga4Q3UW12 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Cnga4Q3UW12 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cnga4Q3UW12 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Cnga4Q3UW12 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cnga4Q3UW12 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cnga4Q3UW12 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cnga4Q3UW12 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Cnga4Q3UW12 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cnga4Q3UW12 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cnga4Q3UW12 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cnga4Q3UW12 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.97■□□□□ 0.31
Cnga4Q3UW12 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cnga4Q3UW12 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Cnga4Q3UW12 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Cnga4Q3UW12 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cnga4Q3UW12 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cnga4Q3UW12 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cnga4Q3UW12 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cnga4Q3UW12 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Cnga4Q3UW12 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cnga4Q3UW12 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cnga4Q3UW12 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cnga4Q3UW12 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.97■□□□□ 0.31
Cnga4Q3UW12 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cnga4Q3UW12 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.96■□□□□ 0.31
Cnga4Q3UW12 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cnga4Q3UW12 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Cnga4Q3UW12 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cnga4Q3UW12 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cnga4Q3UW12 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cnga4Q3UW12 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Cnga4Q3UW12 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cnga4Q3UW12 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cnga4Q3UW12 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cnga4Q3UW12 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC16.96■□□□□ 0.31
Cnga4Q3UW12 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Cnga4Q3UW12 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Cnga4Q3UW12 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cnga4Q3UW12 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cnga4Q3UW12 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cnga4Q3UW12 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Cnga4Q3UW12 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cnga4Q3UW12 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Cnga4Q3UW12 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cnga4Q3UW12 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cnga4Q3UW12 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Cnga4Q3UW12 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Cnga4Q3UW12 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Cnga4Q3UW12 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Cnga4Q3UW12 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Cnga4Q3UW12 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Cnga4Q3UW12 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Cnga4Q3UW12 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.96■□□□□ 0.3
Cnga4Q3UW12 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cnga4Q3UW12 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cnga4Q3UW12 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cnga4Q3UW12 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cnga4Q3UW12 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cnga4Q3UW12 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cnga4Q3UW12 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.95■□□□□ 0.3
Cnga4Q3UW12 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Cnga4Q3UW12 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cnga4Q3UW12 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC16.95■□□□□ 0.3
Cnga4Q3UW12 Gm5408-201ENSMUST00000197998 747 ntBASIC16.95■□□□□ 0.3
Cnga4Q3UW12 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Cnga4Q3UW12 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cnga4Q3UW12 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cnga4Q3UW12 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cnga4Q3UW12 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cnga4Q3UW12 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.95■□□□□ 0.3
Cnga4Q3UW12 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cnga4Q3UW12 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cnga4Q3UW12 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
Cnga4Q3UW12 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cnga4Q3UW12 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms