Protein–RNA interactions for Protein: P56371

Rab4a, Ras-related protein Rab-4A, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab4aP56371 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rab4aP56371 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rab4aP56371 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rab4aP56371 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
Rab4aP56371 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rab4aP56371 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rab4aP56371 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rab4aP56371 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rab4aP56371 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rab4aP56371 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
Rab4aP56371 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rab4aP56371 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC13.21□□□□□ -0.3
Rab4aP56371 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rab4aP56371 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rab4aP56371 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rab4aP56371 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.3
Rab4aP56371 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rab4aP56371 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Rab4aP56371 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rab4aP56371 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Rab4aP56371 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rab4aP56371 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rab4aP56371 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rab4aP56371 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC13.2□□□□□ -0.3
Rab4aP56371 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rab4aP56371 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rab4aP56371 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rab4aP56371 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rab4aP56371 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Rab4aP56371 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rab4aP56371 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rab4aP56371 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC13.2□□□□□ -0.3
Rab4aP56371 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rab4aP56371 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Rab4aP56371 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rab4aP56371 Gm10584-201ENSMUST00000207036 2628 ntBASIC13.2□□□□□ -0.3
Rab4aP56371 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Rab4aP56371 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rab4aP56371 AC154412.1-201ENSMUST00000226540 2786 ntBASIC13.2□□□□□ -0.3
Rab4aP56371 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rab4aP56371 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC13.19□□□□□ -0.3
Rab4aP56371 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rab4aP56371 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rab4aP56371 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rab4aP56371 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rab4aP56371 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rab4aP56371 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Rab4aP56371 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rab4aP56371 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rab4aP56371 Gm15546-201ENSMUST00000122095 826 ntBASIC13.19□□□□□ -0.3
Rab4aP56371 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC13.19□□□□□ -0.3
Rab4aP56371 Gm19094-201ENSMUST00000209791 1246 ntBASIC13.19□□□□□ -0.3
Rab4aP56371 Gm5812-201ENSMUST00000061073 957 ntBASIC13.19□□□□□ -0.3
Rab4aP56371 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Rab4aP56371 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rab4aP56371 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rab4aP56371 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rab4aP56371 Ntrk2-205ENSMUST00000224402 2284 ntBASIC13.19□□□□□ -0.3
Rab4aP56371 AC093043.3-201ENSMUST00000226531 2273 ntBASIC13.19□□□□□ -0.3
Rab4aP56371 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rab4aP56371 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rab4aP56371 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab4aP56371 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab4aP56371 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab4aP56371 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab4aP56371 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab4aP56371 Gm10167-201ENSMUST00000150411 1479 ntBASIC13.18□□□□□ -0.3
Rab4aP56371 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab4aP56371 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab4aP56371 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab4aP56371 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab4aP56371 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rab4aP56371 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab4aP56371 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab4aP56371 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab4aP56371 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC13.18□□□□□ -0.3
Rab4aP56371 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab4aP56371 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
Rab4aP56371 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab4aP56371 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rab4aP56371 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.18□□□□□ -0.3
Rab4aP56371 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab4aP56371 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab4aP56371 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rab4aP56371 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab4aP56371 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab4aP56371 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rab4aP56371 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rab4aP56371 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rab4aP56371 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rab4aP56371 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC13.17□□□□□ -0.3
Rab4aP56371 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Rab4aP56371 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rab4aP56371 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rab4aP56371 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rab4aP56371 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Rab4aP56371 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC13.17□□□□□ -0.3
Rab4aP56371 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Rab4aP56371 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rab4aP56371 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms